RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 PPP1R1AQ13522 171 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 MRM1Q6IN84 353 aaKnown RBP11.36□□□□□ -0.59
NLRC3-202ENST00000359128 CST4P01036 141 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 RNF224P0DH78 156 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 GALP22466 123 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 KHDC3LQ587J8 217 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 WNT2BQ93097 391 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 TRIM77I1YAP6 450 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 SS18L1O75177 396 aaPredicted RBP11.36□□□□□ -0.59
NLRC3-202ENST00000359128 PLPPR5Q32ZL2 321 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 CD300LDQ6UXZ3 194 aa11.36□□□□□ -0.59
NLRC3-202ENST00000359128 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 NDUFB6O95139 128 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 G6PCP35575 357 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 CSRP2Q16527 193 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 ZNF519Q8TB69 540 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 PTHLHP12272 177 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 TIAL1Q01085 375 aaKnown RBP eCLIP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 SLC26A10Q8NG04 563 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 GSX2Q9BZM3 304 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 MMP24Q9Y5R2 645 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 MYO5AQ9Y4I1 1855 aaKnown RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 NAT2P11245 290 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 CD40P25942 277 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 LY6EQ16553 131 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 PIGYQ3MUY2 71 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 KLHDC1Q8N7A1 406 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 FAM222BQ8WU58 562 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 ADAMTSL1Q8N6G6 1762 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 QSER1Q2KHR3 1735 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 CLDN14O95500 239 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 SFTA3P0C7M3 94 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 FGF8P55075 233 aaPredicted RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 LAMTOR1Q6IAA8 161 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 OR2C3Q8N628 320 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 GVQW1Q8N7I0 195 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 EAF1Q96JC9 268 aaPredicted RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 MIOXQ9UGB7 285 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 CDC42EP2O14613 210 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 HERVK_113P61574 105 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 RNF212Q495C1 297 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 GAPTQ8N292 157 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 LSMEM1Q8N8F7 131 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 KCNK15Q9H427 330 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 TMEFF2Q9UIK5 374 aaPredicted RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 A0A1W2PS18 150 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 RPL36A-HNRNPH2H7BZ11 118 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 RAB29O14966 203 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 FOXS1O43638 330 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 NQO2P16083 231 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 PPP1CCP36873 323 aaKnown RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 RPS4XP62701 263 aaKnown RBP11.35□□□□□ -0.59
NLRC3-202ENST00000359128 INSL4Q14641 139 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 PSG5Q15238 335 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 METTL26Q96S19 204 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 MANBALQ9NQG1 85 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 HIGD1AQ9Y241 93 aa11.35□□□□□ -0.59
NLRC3-202ENST00000359128 CD160O95971 181 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 IGSF23A1L1A6 192 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 CHST1O43916 411 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 CTSDP07339 412 aaPredicted RBP11.34□□□□□ -0.59
NLRC3-202ENST00000359128 TSPO2Q5TGU0 170 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 UNQ9370/PRO34162Q6UXP9 181 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 ZNF385AQ96PM9 386 aaKnown RBP11.34□□□□□ -0.59
NLRC3-202ENST00000359128 MTFP1Q9UDX5 166 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 ANXA10Q9UJ72 324 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 P01737 135 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 RAB32Q13637 225 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
NLRC3-202ENST00000359128 ZBTB34Q8NCN2 500 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 OR1L6Q8NGR2 347 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 C16orf92Q96LL3 132 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 SFXN3Q9BWM7 321 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 MRPL37Q9BZE1 423 aaKnown RBP11.34□□□□□ -0.59
NLRC3-202ENST00000359128 METTL1Q9UBP6 276 aaKnown RBP11.34□□□□□ -0.59
NLRC3-202ENST00000359128 PRSS50Q9UI38 385 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 PITPNC1Q9UKF7 332 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 GUK1Q16774 197 aa11.34□□□□□ -0.59
NLRC3-202ENST00000359128 KIAA1324LA8MWY0 1029 aaPredicted RBP11.33□□□□□ -0.6
NLRC3-202ENST00000359128 WNT9BO14905 357 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 IL24Q13007 206 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 TGIF1Q15583 401 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 MOGAT2Q3SYC2 334 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 TM4SF20Q53R12 229 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 MRGPRGQ86SM5 289 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 ANGPTL4Q9BY76 406 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 UBR3Q6ZT12 1888 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 HLA-GP17693 338 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 FOXL2P58012 376 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 ATP1A1-AS1Q5TC04 95 aa11.33□□□□□ -0.6
NLRC3-202ENST00000359128 OR10AC1Q8NH08 325 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms