RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PACRGQ96M98 296 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 OR4F4Q96R69 305 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 NUDT16L1Q9BRJ7 211 aaKnown RBP5.69□□□□□ -1.5
CSDE1-203ENST00000358528 FBLN5Q9UBX5 448 aa5.69□□□□□ -1.5
CSDE1-203ENST00000358528 DOCK10Q96BY6 2186 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 A0A1W2PR77 199 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 BTBD17A6NE02 478 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 FAM166BA8MTA8 275 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 SEC14L6B5MCN3 397 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 PPP5D1E7EU14 171 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 KRASP01116 189 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 G0S2P27469 103 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 CDX1P47902 265 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-203ENST00000358528 CLDN15P56746 228 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 UBE2G2P60604 165 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 PSG4Q00888 419 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF468Q5VIY5 522 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF818PQ6ZRF7 136 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 LYPD6Q86Y78 171 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 PNRC2Q9NPJ4 139 aaKnown RBP5.68□□□□□ -1.5
CSDE1-203ENST00000358528 GPR27Q9NS67 375 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 IGKV1-27A0A075B6S5 117 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 IGKV1-12A0A0C4DH73 117 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ANKRD30BLA7E2S9 258 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 IGKV1D-12P01611 117 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 PSG2P11465 335 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 DTYMKP23919 212 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 FOLR3P41439 243 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 DSCR4P56555 118 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-203ENST00000358528 PRDX4Q13162 271 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 CLN3Q13286 438 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 IGFBP7Q16270 282 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 PYY3Q5JQD4 70 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 NCR3LG1Q68D85 454 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF600Q6ZNG1 722 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF576Q9H609 170 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 KIAA1456Q9P272 454 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ZDHHC8Q9ULC8 765 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 KIR2DS1A0A191URI9 304 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 OR5H1A6NKK0 313 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 CCL4P13236 92 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 KIR2DS4P43632 304 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 RBM11P57052 281 aaKnown RBP5.68□□□□□ -1.5
CSDE1-203ENST00000358528 ERVFRD-1P60508 538 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 HBG1P69891 147 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 HBG2P69892 147 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 KIR2DS1Q14954 304 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 DTX1Q86Y01 620 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 MOB3AQ96BX8 217 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 SRXN1Q9BYN0 137 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 UCK1Q9HA47 277 aa5.68□□□□□ -1.5
CSDE1-203ENST00000358528 MAP1LC3B2A6NCE7 125 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 SYNGR4O95473 234 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 GRPP07492 148 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 SRP19P09132 144 aaKnown RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 VDAC1P21796 283 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 CHRNA7P36544 502 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF816Q0VGE8 651 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 NFAM1Q8NET5 270 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 OR10D3Q8NH80 312 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 NINJ1Q92982 152 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 MSI2Q96DH6 328 aaKnown RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 HINT2Q9BX68 163 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 TM2D1Q9BX74 207 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 MAP1LC3BQ9GZQ8 125 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 TMEM222Q9H0R3 208 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ROS1P08922 2347 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 OR6C6A6NF89 314 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 NPIPB13A6NJU9 1138 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 NPIPB4C9JG80 1138 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 DEGS1O15121 323 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 YKT6O15498 198 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 CDS2O95674 445 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 LYL1P12980 280 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 FOLR2P14207 255 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 CXCL12P48061 93 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ARF1P84077 181 aaKnown RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 KHDC3LQ587J8 217 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 LINC00696Q6ZRV3 163 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ZDHHC23Q8IYP9 409 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 SELENOHQ8IZQ5 122 aaKnown RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 DMBX1Q8NFW5 382 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 RHBDD1Q8TEB9 315 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ADGRG7Q96K78 797 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 ATP5SQ99766 215 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 GLRX2Q9NS18 164 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 FREM1Q5H8C1 2179 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 GPR179Q6PRD1 2367 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 IGKV1D-13A0A0B4J2D9 117 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 XKRY2A2RUG3 117 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 CLEC18AA5D8T8 446 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 K7N7A8 449 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 PITX3O75364 302 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 CBR3O75828 277 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 SERPINA7P05543 415 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 IGKV1-13P0DP09 117 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 HOXB1P14653 301 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-203ENST00000358528 HOXA5P20719 270 aa5.67□□□□□ -1.5
CSDE1-203ENST00000358528 LTBRP36941 435 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms