RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 SPSB2Q99619 263 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 OR2W1Q9Y3N9 320 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 NMBP08949 121 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 COX6A1P12074 109 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 AWAT1Q58HT5 328 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 FDX2Q6P4F2 183 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 YIF1AO95070 293 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 ADH4P08319 380 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 DAOP14920 347 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 LTBRP36941 435 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 C9orf152Q5JTZ5 239 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 ARTNQ5T4W7 220 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 SLC36A1Q7Z2H8 476 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 FLVCR1-AS1Q8TAF5 88 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 GPR132Q9UNW8 380 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 DOCK4Q8N1I0 1966 aa12.74□□□□□ -0.37
SLC6A20-202ENST00000358525 HRASP01112 189 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 RAB13P51153 203 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 FABP9Q0Z7S8 132 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 PCOLCEQ15113 449 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 ETV3LQ6ZN32 361 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OR10G4Q8NGN3 311 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OR10G9Q8NGN4 311 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OR10G7Q8NGN6 311 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 NPDC1Q9NQX5 325 aaPredicted RBP12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 TREM2Q9NZC2 230 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OOEPA6NGQ2 149 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OPN1MWP04001 364 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OPN1MW2P0DN77 364 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OPN1MW3P0DN78 364 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 TMEM50BP56557 158 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 ZNF660Q6AZW8 331 aaPredicted RBP12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 PRR27Q6MZM9 219 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 LINC00114Q6XXX2 140 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 CCL17Q92583 94 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 TUSC1Q2TAM9 212 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 ISOC2Q96AB3 205 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 FAM103A1Q9BTL3 118 aaKnown RBP12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 OR2J1Q9GZK6 312 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 ARG1P05089 322 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 PSG2P11465 335 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 RAB7AP51149 207 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 MOB3BQ86TA1 216 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 APCDD1LQ8NCL9 501 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 SEC11CQ9BY50 192 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 SRXN1Q9BYN0 137 aa12.73□□□□□ -0.37
SLC6A20-202ENST00000358525 IGKV3D-11A0A0A0MRZ8 115 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 CDS2O95674 445 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 PHYHD1Q5SRE7 291 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 GAR1Q9NY12 217 aaKnown RBP12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 TRPM7Q96QT4 1865 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 RNF212Q495C1 297 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 PLAC9Q5JTB6 97 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 NR2C2APQ86WQ0 139 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 TMEM251Q8N6I4 163 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 TMEM147Q9BVK8 224 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 TMEM241Q24JQ0 296 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 MYOZ1Q9NP98 299 aaPredicted RBP12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 C20orf202A1L168 122 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 CYTIPO60759 359 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 OR5B3Q8NH48 314 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 ZDHHC11Q9H8X9 412 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 MSL2Q9HCI7 577 aa12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
SLC6A20-202ENST00000358525 CLDN34H7C241 214 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 CDC34P49427 236 aaPredicted RBP12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 TMEM108Q6UXF1 575 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 OR5D13Q8NGL4 314 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 R3HDM4Q96D70 268 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 CHRNA10Q9GZZ6 450 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 OR5H1A6NKK0 313 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 RPS11P62280 158 aaKnown RBP eCLIP12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 SMIM15Q7Z3B0 74 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 MOGAT3Q86VF5 341 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 SLC35D1Q9NTN3 355 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 ALPK2Q86TB3 2170 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 IGKV1D-43A0A0B4J1Z2 117 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 CLN5O75503 358 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 NTF3P20783 257 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 SCGB2A2Q13296 93 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 LRRC75AQ8NAA5 344 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 ZNF71Q9NQZ8 489 aaPredicted RBP12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 ZNF835Q9Y2P0 537 aa12.71□□□□□ -0.37
SLC6A20-202ENST00000358525 ST8SIA5O15466 376 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 MBPP02686 304 aaPredicted RBP12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 ERVFC1-1P60608 527 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 NHLH2Q02577 135 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 CEACAM21Q3KPI0 293 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 VMA21Q3ZAQ7 101 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 GMPPAQ96IJ6 420 aaPredicted RBP12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 A0A0B4J293 547 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 RAMP1O60894 148 aa12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 F12P00748 615 aaPredicted RBP12.71□□□□□ -0.38
SLC6A20-202ENST00000358525 ANKRD55Q3KP44 614 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms