RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 HERPUD1Q15011 391 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 KRTCAP3Q53RY4 240 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 ANKRD37Q7Z713 158 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 LINC00469Q8N7U9 141 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 RND1Q92730 232 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 ZG16BQ96DA0 208 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 CCL28Q9NRJ3 127 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 SOX21Q9Y651 276 aaPredicted RBP9.87□□□□□ -0.83
COL11A1-202ENST00000358392 OOEPA6NGQ2 149 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 ZNHIT1O43257 154 aa9.87□□□□□ -0.83
COL11A1-202ENST00000358392 CRYABP02511 175 aaKnown RBP9.87□□□□□ -0.83
COL11A1-202ENST00000358392 MRPL24Q96A35 216 aaKnown RBP9.87□□□□□ -0.83
COL11A1-202ENST00000358392 C2CD4DB7Z1M9 353 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 MBPP02686 304 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 SLC25A1P53007 311 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 RELBQ01201 579 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 NKX2-6A6NCS4 301 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 CDX4O14627 284 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 LDLRAD4O15165 306 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 CEACAM3P40198 252 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 TM4SF4P48230 202 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 TMEM108Q6UXF1 575 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 NUP37Q8NFH4 326 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 IL20Q9NYY1 176 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PSG2P11465 335 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PNLIPP16233 465 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 SUMO3P55854 103 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 NAAAQ02083 359 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PERPQ96FX8 193 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 TOX2Q96NM4 488 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 RAB1BQ9H0U4 201 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 A0A1B0GUL6 1792 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 B4GALNT1Q00973 533 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 EWSR1Q01844 656 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 AMMECR1LQ6DCA0 310 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 JMJD6Q6NYC1 403 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 Q6ZS52 159 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 LYZL2Q7Z4W2 148 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 Q8WTZ3 238 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 FGF14Q92915 247 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 P2RX4Q99571 388 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 HSPB9Q9BQS6 159 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 MPLP40238 635 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 ROM1Q03395 351 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 BHLHA15Q7RTS1 189 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 OR8B3Q8NGG8 313 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PTPMT1Q8WUK0 201 aaPredicted RBP9.86□□□□□ -0.83
COL11A1-202ENST00000358392 OR8B2Q96RD0 313 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 IGHV5-51A0A0C4DH38 117 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 C9orf172C9J069 976 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 PDE6DO43924 150 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 NSUN5P2Q63ZY6 315 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 CYB5R2Q6BCY4 276 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 RAB24Q969Q5 203 aa9.86□□□□□ -0.83
COL11A1-202ENST00000358392 TMIGD3P0DMS9 266 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 PRICKLE4Q2TBC4 344 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 LSMEM1Q8N8F7 131 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 FAM216AQ8WUB2 273 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 MVB12AQ96EY5 273 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 PHF7Q9BWX1 381 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 CXorf1O96002 111 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 HIST1H1BP16401 226 aaKnown RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 CTLA4P16410 223 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 CCR5P51681 352 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 ACVR1Q04771 509 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 ANXA10Q9UJ72 324 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 ECM29Q5VYK3 1845 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 THSD4Q6ZMP0 1018 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 WDFY1Q8IWB7 410 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 BCL7CQ8WUZ0 217 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 PARD6GQ9BYG4 376 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 RCC2Q9P258 522 aaKnown RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 PITPNC1Q9UKF7 332 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 FABP2P12104 132 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 ASB10Q8WXI3 467 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 HMSDA8MTL9 139 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 CDIPTO14735 213 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 LGALSLQ3ZCW2 172 aaPredicted RBP9.85□□□□□ -0.83
COL11A1-202ENST00000358392 SLC25A33Q9BSK2 321 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 SMOC1Q9H4F8 434 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 GLRX2Q9NS18 164 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 RAXQ9Y2V3 346 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 KDM3BQ7LBC6 1761 aa9.85□□□□□ -0.83
COL11A1-202ENST00000358392 NEU3Q9UQ49 428 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 INSIG2Q9Y5U4 225 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 N4BP2Q86UW6 1770 aaPredicted RBP9.84□□□□□ -0.83
COL11A1-202ENST00000358392 SMIM6P0DI80 62 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 HIST1H1EP10412 219 aaKnown RBP9.84□□□□□ -0.83
COL11A1-202ENST00000358392 PPP1CCP36873 323 aaKnown RBP9.84□□□□□ -0.83
COL11A1-202ENST00000358392 ZNF385CQ66K41 422 aaPredicted RBP9.84□□□□□ -0.83
COL11A1-202ENST00000358392 OR4C13Q8NGP0 309 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 CHAC2Q8WUX2 184 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 HARBI1Q96MB7 349 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 WFIKKN1Q96NZ8 548 aa9.84□□□□□ -0.83
COL11A1-202ENST00000358392 HDHD3Q9BSH5 251 aaPredicted RBP9.84□□□□□ -0.83
COL11A1-202ENST00000358392 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms