RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 FDCSPQ8NFU4 85 aa13.5□□□□□ -0.25
PHTF1-201ENST00000357783 OR4D5Q8NGN0 318 aa13.5□□□□□ -0.25
PHTF1-201ENST00000357783 ADAT1Q9BUB4 502 aaKnown RBP13.5□□□□□ -0.25
PHTF1-201ENST00000357783 RHOFQ9HBH0 211 aa13.5□□□□□ -0.25
PHTF1-201ENST00000357783 WFDC1Q9HC57 220 aa13.5□□□□□ -0.25
PHTF1-201ENST00000357783 CCL28Q9NRJ3 127 aa13.5□□□□□ -0.25
PHTF1-201ENST00000357783 TUSC2O75896 110 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 WISP2O76076 250 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 ZNF44P15621 663 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 ZNF14P17017 642 aaPredicted RBP13.49□□□□□ -0.25
PHTF1-201ENST00000357783 IGHV1-2P23083 117 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 LINC00596Q86U02 117 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 PUSL1Q8N0Z8 303 aaKnown RBP13.49□□□□□ -0.25
PHTF1-201ENST00000357783 OR2J1Q9GZK6 312 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 PCP4L1A6NKN8 68 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 J3QT63 122 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 TNFSF12O43508 249 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 MUC1P15941 1255 aaPredicted RBP13.49□□□□□ -0.25
PHTF1-201ENST00000357783 UBE2NP61088 152 aaKnown RBP13.49□□□□□ -0.25
PHTF1-201ENST00000357783 IL13RA2Q14627 380 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 Q6ZRG5 221 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 UBAC2Q8NBM4 344 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 DMBX1Q8NFW5 382 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 TRIB1Q96RU8 372 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 PKIBQ9C010 78 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 CDH20Q9HBT6 801 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 ZFP57Q9NU63 452 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 DLL3Q9NYJ7 618 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 POMT1Q9Y6A1 747 aa13.49□□□□□ -0.25
PHTF1-201ENST00000357783 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
PHTF1-201ENST00000357783 SMPD2O60906 423 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 FTH1P19P0C7X4 201 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 PPP1CBP62140 327 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 NHLH2Q02577 135 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 PIP4P1Q86T03 277 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 WDR86Q86TI4 376 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 DEGS1O15121 323 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 F12P00748 615 aaPredicted RBP13.48□□□□□ -0.25
PHTF1-201ENST00000357783 P2RY1P47900 373 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 RND3P61587 244 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 GPR157Q5UAW9 335 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 SELENOHQ8IZQ5 122 aaKnown RBP13.48□□□□□ -0.25
PHTF1-201ENST00000357783 SVBPQ8N300 66 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 RTL8AQ9BWD3 113 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 TLNRD1Q9H1K6 362 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 RIMS4Q9H426 269 aaPredicted RBP13.48□□□□□ -0.25
PHTF1-201ENST00000357783 PARD6AQ9NPB6 346 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 UQCC1Q9NVA1 299 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 KLF2Q9Y5W3 355 aaPredicted RBP13.48□□□□□ -0.25
PHTF1-201ENST00000357783 TRAV39A0A0B4J263 110 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 CDRT15L2A8MXV6 281 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 CTXN2P0C2S0 81 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 ASCL1P50553 236 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 CAV2P51636 162 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 B2MP61769 119 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 GNMTQ14749 295 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 ALKBH6Q3KRA9 238 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 PCSK4Q6UW60 755 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 CNEP1R1Q8N9A8 125 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 TMEM56Q96MV1 263 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 CLCF1Q9UBD9 225 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 TMEM56-RWDD3S4R434 201 aa13.48□□□□□ -0.25
PHTF1-201ENST00000357783 CFAP47Q6ZTR5 3102 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 ZFHX4Q86UP3 3567 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 ADAM20O43506 726 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 CDS2O95674 445 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 WT1P19544 449 aaPredicted RBP13.47□□□□□ -0.25
PHTF1-201ENST00000357783 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
PHTF1-201ENST00000357783 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 SWI5Q1ZZU3 235 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 LILRB1Q8NHL6 650 aaPredicted RBP13.47□□□□□ -0.25
PHTF1-201ENST00000357783 IL1F10Q8WWZ1 152 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 PRELID3BQ9Y3B1 194 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 SIRPB1O00241 398 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 CD82P27701 267 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 MRPL49Q13405 166 aaKnown RBP13.47□□□□□ -0.25
PHTF1-201ENST00000357783 BTNL8Q6UX41 500 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 SCCPDHQ8NBX0 429 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 CLRN3Q8NCR9 226 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 GTF3AQ92664 365 aaKnown RBP13.47□□□□□ -0.25
PHTF1-201ENST00000357783 KIRREL1Q96J84 757 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 MAGT1Q9H0U3 335 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 PARP11Q9NR21 331 aa13.47□□□□□ -0.25
PHTF1-201ENST00000357783 OR8U9P0C7N5 309 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 NKX2-1P43699 371 aaPredicted RBP13.46□□□□□ -0.25
PHTF1-201ENST00000357783 Q6P435 159 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 CMTM1Q8IZ96 169 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 OR8U1Q8NH10 309 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 OR10J5Q8NHC4 309 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 SLC25A40Q8TBP6 338 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 NRIP2Q9BQI9 281 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 SH3BGRL3Q9H299 93 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 ARV1Q9H2C2 271 aa13.46□□□□□ -0.25
PHTF1-201ENST00000357783 FAM24AA6NFZ4 105 aa13.46□□□□□ -0.26
PHTF1-201ENST00000357783 SLC33A1O00400 549 aaPredicted RBP13.46□□□□□ -0.26
PHTF1-201ENST00000357783 SSSCA1O60232 199 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms