RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 GNB1P62873 340 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 RGS21Q2M5E4 152 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 LRRC75BQ2VPJ9 315 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 C6orf201Q7Z4U5 140 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 LRRTM1Q86UE6 522 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 MYPOPQ86VE0 399 aaPredicted RBP7.71□□□□□ -1.18
UPF2-202ENST00000357604 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.71□□□□□ -1.18
UPF2-202ENST00000357604 DCTN5Q9BTE1 182 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 NCOR1P1Q9H4R4 102 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 SEBOXQ9HB31 216 aaPredicted RBP7.71□□□□□ -1.18
UPF2-202ENST00000357604 PSG11Q9UQ72 335 aa7.71□□□□□ -1.18
UPF2-202ENST00000357604 MLNRO43193 412 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 FSTL3O95633 263 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 VDAC1P21796 283 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 VAMP1P23763 118 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 MPZP25189 248 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 RPS19P39019 145 aaKnown RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 MIDNQ504T8 468 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 NHLRC3Q5JS37 347 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 OR52M1Q8NGK5 317 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 TM2D1Q9BX74 207 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 NPFFR1Q9GZQ6 430 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 SLC33A1O00400 549 aaPredicted RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 EIF4EP06730 217 aaKnown RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 IGFBP3P17936 291 aaPredicted RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 TATDN3Q17R31 274 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 ATPAF1Q5TC12 328 aaPredicted RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 SLC35G3Q8N808 338 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 TAF9BQ9HBM6 251 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 TMEM165Q9HC07 324 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 SDHAF2Q9NX18 166 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 GFOD1Q9NXC2 390 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 CACNG2Q9Y698 323 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 KBTBD11-OT1A0A1B0GTJ5 212 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 M0R1X1 148 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 WNT9BO14905 357 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 LY86O95711 162 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 TFAP2AP05549 437 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 CLEC2LP0C7M8 214 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 HLA-DMAP28067 261 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 GNMTQ14749 295 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 ZNF529Q6P280 563 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 OR1S1Q8NH92 325 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 GPR31O00270 319 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 DEFA4P12838 97 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 PAX1P15863 534 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 C11orf71Q6IPW1 123 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 H2BFWTQ7Z2G1 175 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 TMED4Q7Z7H5 227 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 ZCCHC24Q8N2G6 241 aaKnown RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 OR2T10Q8NGZ9 312 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 OR4S2Q8NH73 311 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 ZNF2Q9BSG1 426 aaPredicted RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 RSPO3Q9BXY4 272 aaPredicted RBP7.7□□□□□ -1.18
UPF2-202ENST00000357604 AUNIPQ9H7T9 357 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 MTCH1Q9NZJ7 389 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 DPM3Q9P2X0 92 aa7.7□□□□□ -1.18
UPF2-202ENST00000357604 TRAV8-7A0A075B6U6 113 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 C5orf51A6NDU8 294 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 KCNAB3O43448 404 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 CFHR2P36980 270 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 CR1LQ2VPA4 569 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DMRTC1Q5HYR2 192 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 HPSE2Q8WWQ2 592 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 ORAI1Q96D31 301 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 ZNF486Q96H40 463 aaPredicted RBP7.69□□□□□ -1.18
UPF2-202ENST00000357604 HSD17B10Q99714 261 aaKnown RBP7.69□□□□□ -1.18
UPF2-202ENST00000357604 SIRT7Q9NRC8 400 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 A0A1W2PRD5 423 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 A0A1W2PRF3 423 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 A0A1W2PRM7 423 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 PHF1O43189 567 aaPredicted RBP7.69□□□□□ -1.18
UPF2-202ENST00000357604 LILRA1O75019 489 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 RHBDL1O75783 438 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 PTBP3O95758 552 aaKnown RBP7.69□□□□□ -1.18
UPF2-202ENST00000357604 HBZP02008 142 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 OR5H8P0DN80 308 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 CEBPDP49716 269 aaPredicted RBP7.69□□□□□ -1.18
UPF2-202ENST00000357604 MPPED2Q15777 294 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 TMEM249Q2WGJ8 235 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 KAAG1Q9UBP8 84 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 A0A1B0GW55 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 TRIM64A6NGJ6 449 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 NUDT19A8MXV4 375 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 HAX1O00165 279 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4L2P0CJ85 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4L3P0CJ86 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4L4P0CJ87 422 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4L5P0CJ88 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4L6P0CJ89 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4L7P0CJ90 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 AKR1C4P17516 323 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 STEAP1BQ6NZ63 245 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 OR2D2Q9H210 308 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 ABCG5Q9H222 651 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 MMP26Q9NRE1 261 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 DUX4Q9UBX2 424 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 WASHC3Q9Y3C0 194 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 NUBP2Q9Y5Y2 271 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms