RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZNF343Q6P1L6 599 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 STXBP6Q8NFX7 210 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 A0A1B0GU03 582 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 A0A1W2PRX2 142 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 MAP1LC3B2A6NCE7 125 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 HPXP02790 462 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 SLC25A53Q5H9E4 307 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 UNQ9370/PRO34162Q6UXP9 181 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 CT55Q8WUE5 264 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 MAP1LC3BQ9GZQ8 125 aa15.28■□□□□ 0.04
COL27A1-201ENST00000356083 TRAV8-7A0A075B6U6 113 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 MPZL1O95297 269 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 WDR73Q6P4I2 378 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 ASCL5Q7RTU5 278 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 FAM219AQ8IW50 185 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 LDLRAD3Q86YD5 345 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 ATG101Q9BSB4 218 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 MUC4Q99102 2169 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 WNK1Q9H4A3 2382 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 OOEPA6NGQ2 149 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 SMPD2O60906 423 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 ZNF253O75346 499 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 ZBTB37Q5TC79 503 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 C10orf113Q5VZT2 155 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 FAHD1Q6P587 224 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 LIAT1Q6ZQX7 453 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 R3HDM4Q96D70 268 aa15.27■□□□□ 0.04
COL27A1-201ENST00000356083 CD1EP15812 388 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 CHAC2Q8WUX2 184 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 GSX2Q9BZM3 304 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 CCL27Q9Y4X3 112 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 EPPINO95925 133 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 GABRA1P14867 456 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 PSG6Q00889 435 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 FAM26EQ8N5C1 309 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 OR1K1Q8NGR3 316 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 PHYHIPLQ96FC7 376 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 HEXA-AS1Q9H8Q6 139 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 CDIPTO14735 213 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 CARFQ8N187 725 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 OR4D9Q8NGE8 314 aa15.27■□□□□ 0.03
COL27A1-201ENST00000356083 PGA3P0DJD8 388 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 MPV17LQ2QL34 196 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 PRR13Q9NZ81 148 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 WSB1Q9Y6I7 421 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 A0A1B0GUH1 482 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 GABRG2P18507 467 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 ELOVL1Q9BW60 279 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 ZNHIT1O43257 154 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 COX6CP09669 75 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 AFMIDQ63HM1 303 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 DIRC2Q96SL1 478 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 AESQ08117 197 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 CIRBPQ14011 172 aaKnown RBP15.26■□□□□ 0.03
COL27A1-201ENST00000356083 DHRS3O75911 302 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 SKP2Q13309 424 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 C21orf62-AS1Q17RA5 79 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 DEDDO75618 318 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 TFAP2AP05549 437 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 ZNF735P0CB33 412 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 RNF165Q6ZSG1 346 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 ADAMTS17Q8TE56 1095 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 GUCD1Q96NT3 240 aa15.26■□□□□ 0.03
COL27A1-201ENST00000356083 ABLIM3O94929 683 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 GEMIN7Q9H840 131 aaKnown RBP15.25■□□□□ 0.03
COL27A1-201ENST00000356083 BTG1P62324 171 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 CDK5R1Q15078 307 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 PNLIPRP3Q17RR3 467 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 RPS4Y2Q8TD47 263 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 NTN1O95631 604 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 CSF2RBP32927 897 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 TTC32Q5I0X7 151 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 C11orf87Q6NUJ2 197 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 GATA6Q92908 595 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 OR2A5Q96R48 311 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 GLRX2Q9NS18 164 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 SLC25A10Q9UBX3 287 aaPredicted RBP15.25■□□□□ 0.03
COL27A1-201ENST00000356083 MAS1LP35410 378 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 MED30Q96HR3 178 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 GPR35Q9HC97 309 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 LINC01387J3KSC0 135 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 CCL8P80075 99 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 BPIFA4PQ86YQ2 179 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 SPSB1Q96BD6 273 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 LMX1BO60663 402 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 RAB40CQ96S21 281 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 GPR27Q9NS67 375 aa15.25■□□□□ 0.03
COL27A1-201ENST00000356083 TMEM272A0A1B0GTI8 110 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 HAND1O96004 215 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 HIKESHIQ53FT3 197 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 SUMO2P61956 95 aaKnown RBP15.24■□□□□ 0.03
COL27A1-201ENST00000356083 POLR2GP62487 172 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■□□□□ 9.8
COL27A1-201ENST00000356083 VN1R17PQ8TDU5 208 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 ZCCHC14Q8WYQ9 949 aaKnown RBP15.24■□□□□ 0.03
COL27A1-201ENST00000356083 TANC2Q9HCD6 1990 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 TSPAN13O95857 204 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 OVCH2Q7RTZ1 564 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 K7ERU9 68 aa15.24■□□□□ 0.03
COL27A1-201ENST00000356083 C1QBP02746 253 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms