RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 FAM206AQ9NX38 181 aa10.75□□□□□ -0.69
COLCA1-201ENST00000355430 CD8AP01732 235 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 EWSR1Q01844 656 aaKnown RBP eCLIP10.74□□□□□ -0.69
COLCA1-201ENST00000355430 ATRAIDQ6UW56 229 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 C17orf78Q8N4C9 275 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 VWCEQ96DN2 955 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 CHST5Q9GZS9 411 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 SMIM6P0DI80 62 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 CTSSP25774 331 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 GPR12P47775 334 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 FZR1Q9UM11 496 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 SCN5AQ14524 2016 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 SULT1A2P50226 295 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 IGLV3-21P80748 117 aaPredicted RBP10.74□□□□□ -0.69
COLCA1-201ENST00000355430 INO80CQ6PI98 192 aaPredicted RBP10.74□□□□□ -0.69
COLCA1-201ENST00000355430 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 NKX2-6A6NCS4 301 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 FAM87AP0C7U9 286 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 COX5AP20674 150 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 P2RY4P51582 365 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 UBE2G2P60604 165 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF154Q13106 437 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 C5orf66Q9H5L9 145 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 HEXA-AS1Q9H8Q6 139 aa10.74□□□□□ -0.69
COLCA1-201ENST00000355430 TMEM8BA6NDV4 472 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 MPTX1A8MV57 137 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 HKR1P10072 659 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 P2RY6Q15077 328 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 PLPPR5Q32ZL2 321 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 ATP1A1-AS1Q5TC04 95 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 FBXW9Q5XUX1 488 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 TRAV14DV4A0A0A6YYC5 116 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 E9PQ18 207 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 GNB1P62873 340 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 TLE1Q04724 770 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 IGSF11Q5DX21 431 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 UNQ6494/PRO21346Q6UXR6 183 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 LRRC75AQ8NAA5 344 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 UBAC2Q8NBM4 344 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 PRO1933Q9H354 126 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 MTCH1Q9NZJ7 389 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 CACNG5Q9UF02 275 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 RPH3ALQ9UNE2 315 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 TRAV38-1A0A0B4J264 116 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 NPIPB9F8W1W9 429 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 NHLH2Q02577 135 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 ACOT6Q3I5F7 207 aaPredicted RBP10.73□□□□□ -0.69
COLCA1-201ENST00000355430 FAM210BQ96KR6 192 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 ZDBF2Q9HCK1 2354 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 DEDDO75618 318 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 MGST1P10620 155 aaKnown RBP10.73□□□□□ -0.69
COLCA1-201ENST00000355430 SLC25A6P12236 298 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 PRF1P14222 555 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 LPAR6P43657 344 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 TEX30Q5JUR7 227 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 EDARADDQ8WWZ3 215 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 SAP30LQ9HAJ7 183 aa10.73□□□□□ -0.69
COLCA1-201ENST00000355430 CLDN34H7C241 214 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 PPYP01298 95 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 MBP02144 154 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 ADH4P08319 380 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 HLA-DRB3P79483 266 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 GAPTQ8N292 157 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 CXXC4Q9H2H0 198 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 BCL3P20749 454 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 DLK1P80370 383 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 RTP5Q14D33 572 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 RBMXL3Q8N7X1 1067 aaKnown RBP10.72□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF385AQ96PM9 386 aaKnown RBP10.72□□□□□ -0.69
COLCA1-201ENST00000355430 RAB40CQ96S21 281 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 MIOXQ9UGB7 285 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 CHST1O43916 411 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 PGA4P0DJD7 388 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 COX6A1P12074 109 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 ANGPTL4Q9BY76 406 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 CHRNA10Q9GZZ6 450 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 AMMECR1Q9Y4X0 333 aaPredicted RBP10.72□□□□□ -0.69
COLCA1-201ENST00000355430 LHFPL6Q9Y693 200 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 MAP1LC3B2A6NCE7 125 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 CEACAM3P40198 252 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
COLCA1-201ENST00000355430 FAM214BQ7L5A3 538 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 OR5D13Q8NGL4 314 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 C10orf35Q96D05 121 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 ABHD17AQ96GS6 310 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 MAP1LC3BQ9GZQ8 125 aa10.72□□□□□ -0.69
COLCA1-201ENST00000355430 KRASP01116 189 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CT45A6P0DMU7 189 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CT45A5P0DMU8 189 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CT45A7P0DMV0 189 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 ENDOGQ14249 297 aaKnown RBP10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CT45A1Q5HYN5 189 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 CT45A3Q8NHU0 189 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 AP1S3Q96PC3 154 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
COLCA1-201ENST00000355430 ZNF320A2RRD8 509 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms