RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 LTC4SQ16873 150 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 PIGYQ3MUY2 71 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 SATL1Q86VE3 508 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 CBR4Q8N4T8 237 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 Q8NFD4 153 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 OR10K1Q8NGX5 313 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 RHOXF1Q8NHV9 184 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 RFESDQ8TAC1 157 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 MRGPRDQ8TDS7 321 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 TNFAIP8L1Q8WVP5 186 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 CPNE2Q96FN4 548 aaPredicted RBP11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 GPER1Q99527 375 aa11.45□□□□□ -0.58
PRPF40A-201ENST00000354363 TMEM11P17152 192 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 HOXD3P31249 432 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 KCNJ3P48549 501 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 RPL23AP62750 156 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 RAB40BQ12829 278 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 HES1Q14469 280 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 ASCL4Q6XD76 172 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 MRPL41Q8IXM3 137 aaKnown RBP11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 OR8H3Q8N146 312 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 OR52I1Q8NGK6 324 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 HAVCR2Q8TDQ0 301 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 RGP1Q92546 391 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 NOL4LQ96MY1 436 aaPredicted RBP11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 TAS2R4Q9NYW5 299 aa11.44□□□□□ -0.58
PRPF40A-201ENST00000354363 TRAV39A0A0B4J263 110 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 MAGEB3O15480 346 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 FGF16O43320 207 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 MPZL2O60487 215 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 SSTR5P35346 364 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 SOX2P48431 317 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 RAB7AP51149 207 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 GTF2A1P52655 376 aaPredicted RBP11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 HNF4GQ14541 408 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 RSU1Q15404 277 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 DEFB121Q5J5C9 76 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 VAX1Q5SQQ9 334 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 ZFP1Q6P2D0 407 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 SLC16A12Q6ZSM3 486 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 C18orf65Q6ZTR6 163 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 OR10A7Q8NGE5 316 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 OR51D1Q8NGF3 324 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 CHPT1Q8WUD6 406 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 Q96MT0 163 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 JAM3Q9BX67 310 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
PRPF40A-201ENST00000354363 A0A1W2PPE3 182 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 HTR3BO95264 441 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 THBS3P49746 956 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 OR2W3Q7Z3T1 314 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 SUMF2Q8NBJ7 301 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 DPCDQ9BVM2 203 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 MRPS18AQ9NVS2 196 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 LINC00527Q9UJ94 153 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 SERPINE3A8MV23 424 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 LIMS3P0CW19 117 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 LIMS4P0CW20 117 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 ZNF816Q0VGE8 651 aaPredicted RBP11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 C11orf87Q6NUJ2 197 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 SLC29A1Q99808 456 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 GPR61Q9BZJ8 451 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 IFT22Q9H7X7 185 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 ZFP57Q9NU63 452 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 ST3GAL6Q9Y274 331 aa11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 RPL36Q9Y3U8 105 aaKnown RBP11.42□□□□□ -0.58
PRPF40A-201ENST00000354363 KMT2CQ8NEZ4 4911 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 LOC100130705A0A1B0GUX0 176 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 HSD17B6O14756 317 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 CDRT1O95170 752 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 IGHG2P01859 326 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 RBM11P57052 281 aaKnown RBP11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 EBI3Q14213 229 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 NHLRC3Q5JS37 347 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 XAF1Q6GPH4 301 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 GPR148Q8TDV2 347 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 APH1BQ8WW43 257 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 DPF1Q92782 380 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 C9orf16Q9BUW7 83 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 METTL9Q9H1A3 318 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 FAM118AQ9NWS6 357 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 IL36GQ9NZH8 169 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 ING4Q9UNL4 249 aa11.41□□□□□ -0.58
PRPF40A-201ENST00000354363 IGHV1-3A0A0C4DH29 117 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 NUDT19A8MXV4 375 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 CD2P06729 351 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 MYCNOSP40205 109 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 KLHL22Q53GT1 634 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 MOB3BQ86TA1 216 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 STPG2Q8N412 459 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 COMMD1Q8N668 190 aa11.4□□□□□ -0.58
PRPF40A-201ENST00000354363 KLHL30-AS1Q8NEE0 82 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms