RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TRAPPC3O43617 180 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 STX10O60499 249 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZFYVE9O95405 1425 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TCN2P20062 427 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CCNE1P24864 410 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 S100A2P29034 98 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TSPOP30536 169 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SSTR5P35346 364 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 NUP107P57740 925 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CRADDP78560 199 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 MRPS25P82663 173 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CD164Q04900 197 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 C16orf72Q14CZ0 275 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 KLHL12Q53G59 568 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PTRHD1Q6GMV3 140 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM173BQ6P4H8 233 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 LRRC34Q8IZ02 419 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PGAM4Q8N0Y7 254 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 MCOLN3Q8TDD5 553 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 HGDQ93099 445 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 DGCR14Q96DF8 476 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 NARS2Q96I59 477 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 NRIP2Q9BQI9 281 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF426Q9BUY5 554 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BOLA2Q9H3K6 86 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 VAPAQ9P0L0 249 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 C3orf18Q9UK00 162 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PYCARDQ9ULZ3 195 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 AP4S1Q9Y587 144 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FADS3Q9Y5Q0 445 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM186AA6NE01 2351 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CDC42BPGQ6DT37 1551 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 TROQ12816 1431 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 A0A0G2JND7 137 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 A0A1W2PRG6 482 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM25AB3EWG3 89 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM25CB3EWG5 89 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM25GB3EWG6 89 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 DNASE2O00115 360 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CYTH3O43739 400 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CCDC22O60826 627 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SNAP29O95721 258 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RPS17P08708 135 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 OCM2P0CE71 109 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 OCMP0CE72 109 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF7P17097 686 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 OR12D2P58182 307 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SNAP25P60880 206 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PITPNAQ00169 270 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PPIDQ08752 370 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GNA13Q14344 377 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GINS1Q14691 196 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CEACAM21Q3KPI0 293 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 COQ5Q5HYK3 327 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 IDNKQ5T6J7 187 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 THOC7Q6I9Y2 204 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FAM45BPQ6NSW5 357 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PPP1R2P3Q6NXS1 205 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 STX19Q8N4C7 294 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SPICQ8N5J4 248 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF485Q8NCK3 441 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ATP6V1C2Q8NEY4 427 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RNASE11Q8TAA1 199 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BLNKQ8WV28 456 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RORBQ92753 470 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BMFQ96LC9 184 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 OR4K3Q96R72 315 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 METTL26Q96S19 204 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 GPR21Q99679 349 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 DCUN1D5Q9BTE7 237 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 OR52D1Q9H346 318 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF230Q9UIE0 474 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ATPIF1Q9UII2 106 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF222Q9UK12 451 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 PSMD13Q9UNM6 376 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ADGRL2O95490 1459 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 MN1Q10571 1320 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FRYLO94915 3013 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ITPR3Q14573 2671 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 LOC102724200A0A096LPH7 203 aaPredicted RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 C8orf87E5RJ46 101 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 FFAR1O14842 300 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 BCL2L11O43521 198 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 NDUFS5O43920 106 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RAB36O95755 333 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 REG1AP05451 166 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CALB1P05937 261 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV4-34P06331 123 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CXCR1P25024 350 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 SLCO1A2P46721 670 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 RAB38P57729 211 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ACTBP60709 375 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 UBE2NP61088 152 aaKnown RBP1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ACTG1P63261 375 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 CCDC153Q494R4 210 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 DCUN1D2Q6PH85 259 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 Q6ZR03 302 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 MARCH3Q86UD3 253 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 LFNGQ8NES3 379 aa1.11□□□□□ -2.23
BRCA1-202ENST00000354071 ANKRD7Q92527 254 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms