RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 Q6ZSR6 202 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 POC1BQ8TC44 478 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 VAMP8Q9BV40 100 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TBX21Q9UL17 535 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 CLDN16Q9Y5I7 305 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 C20orf202A1L168 122 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 GRIFINA4D1Z8 144 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 E9PLN8 166 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 HSPB6O14558 160 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 HRASP01112 189 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 PPYP01298 95 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TNFP01375 233 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 IGHMP01871 453 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 CLPSP04118 112 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 PFN1P07737 140 aaKnown RBP6.61□□□□□ -1.35
BRCA1-201ENST00000352993 BMP5P22003 454 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 SRPXP78539 464 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 OR2AE1Q8NHA4 323 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 EXTL1Q92935 676 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 BORCS8Q96FH0 119 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 BMFQ96LC9 184 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 ANGPTL4Q9BY76 406 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 PPIAL4AQ9Y536 164 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TRAV34A0A0B4J273 112 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM210A6NLX4 147 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM50AO95807 157 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF16P17020 682 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-201ENST00000352993 ARL4DP49703 201 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 PSMB3P49720 205 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 RAB7AP51149 207 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 MRPS11P82912 194 aaKnown RBP6.61□□□□□ -1.35
BRCA1-201ENST00000352993 IL24Q13007 206 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 MALLQ13021 153 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 MYBPHQ13203 477 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 MRGPRGQ86SM5 289 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 PRR18Q8N4B5 295 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 GBGT1Q8N5D6 347 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 OR51G1Q8NGK1 321 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 OR51H1Q8NH63 302 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 HLA-CQ95604 372 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 SPTBN5Q9NRC6 3674 aaKnown RBP6.61□□□□□ -1.35
BRCA1-201ENST00000352993 PLEK2Q9NYT0 353 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 IGHV3-20A0A0C4DH32 117 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 CHRNB4P30926 498 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 IGLV3-21P80748 117 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 ZFP36L1Q07352 338 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 BAXQ07812 192 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 FOXF1Q12946 379 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 LRTM2Q8N967 370 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF709Q8N972 641 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 OR2V1Q8NHB1 315 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 CMTM2Q8TAZ6 248 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 Q96M66 194 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 FAM103A1Q9BTL3 118 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM222Q9H0R3 208 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 KLRF1Q9NZS2 232 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TCFL5Q9UL49 500 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 ST3GAL6Q9Y274 331 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 H3BMH7 237 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TNFRSF10CO14798 259 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 DHRS3O75911 302 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 SEMA4FO95754 770 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 POU2F2P09086 479 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 HNRNPA1P09651 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 HOXB2P14652 356 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 BRS3P32247 399 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 GRB2P62993 217 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TFF2Q03403 129 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 SHHQ15465 462 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TDRG1Q3Y452 100 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 OR8G2PQ6IF36 304 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 C9orf40Q8IXQ3 194 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 ADIPOR1Q96A54 375 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 RBM24Q9BX46 236 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TM2D1Q9BX74 207 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 SLC25A22Q9H936 323 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 SLC7A10Q9NS82 523 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 MRPS18CQ9Y3D5 142 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 HNF1AP20823 631 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 HNRNPA2B1P22626 353 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 MDH2P40926 338 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 FOXL2P58012 376 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM183BQ1AE95 376 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TGIF2LYQ8IUE0 185 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 SELENOHQ8IZQ5 122 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 GAPTQ8N292 157 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 MRPL30Q8TCC3 161 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 FGF14Q92915 247 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 MOB3AQ96BX8 217 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 CIB3Q96Q77 187 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TXN2Q99757 166 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 MIEN1Q9BRT3 115 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 TWSG1Q9GZX9 223 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 OR6C3Q9NZP0 311 aa6.6□□□□□ -1.35
BRCA1-201ENST00000352993 RBM7Q9Y580 266 aaKnown RBP6.6□□□□□ -1.35
BRCA1-201ENST00000352993 ESPL1Q14674 2120 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms