RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 Q6ZT83 130 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 FADS6Q8N9I5 356 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 KCNIP2Q9NS61 270 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 RASL12Q9NYN1 266 aa11.85□□□□□ -0.51
SMC6-201ENST00000351948 FAM208BQ5VWN6 2430 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 CLDN14O95500 239 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 OPRK1P41145 380 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 MPV17LQ2QL34 196 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 ADAD2Q8NCV1 583 aaKnown RBP11.84□□□□□ -0.51
SMC6-201ENST00000351948 PLXNA3P51805 1871 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 USF3Q68DE3 2245 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 RPS10-NUDT3A0A1W2PQS6 291 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 SNAPINO95295 136 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 HPXP02790 462 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 RPS10P46783 165 aaKnown RBP11.84□□□□□ -0.51
SMC6-201ENST00000351948 EXOSC2Q13868 293 aaKnown RBP11.84□□□□□ -0.51
SMC6-201ENST00000351948 FAM131CQ96AQ9 280 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 SAT2Q96F10 170 aaPredicted RBP11.84□□□□□ -0.51
SMC6-201ENST00000351948 NMES1Q9C002 83 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 TRBV5-5A0A0J9YX44 114 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 NPBWR2P48146 333 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 FAM3AP98173 230 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 ACSF3Q4G176 576 aaPredicted RBP11.84□□□□□ -0.51
SMC6-201ENST00000351948 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 RPS4Y2Q8TD47 263 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 SFXN3Q9BWM7 321 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 CRYM-AS1A6NIL9 109 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 NPBWR1P48145 328 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 TNXAQ16473 311 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
SMC6-201ENST00000351948 CXCL3P19876 107 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 GZMHP20718 246 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 TEX30Q5JUR7 227 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 MARC2Q969Z3 335 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 MARVELD1Q9BSK0 173 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.83□□□□□ -0.52
SMC6-201ENST00000351948 MED13LQ71F56 2210 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 IGHV3-72A0A0B4J1Y9 119 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 C1orf196B1AJZ1 125 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 COX6B1P14854 86 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 ENDOGQ14249 297 aaKnown RBP11.83□□□□□ -0.52
SMC6-201ENST00000351948 SVBPQ8N300 66 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 LPAR5Q9H1C0 372 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 RNF122Q9H9V4 155 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 TMED3Q9Y3Q3 217 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 KCNMB2Q9Y691 235 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 CELA3BP08861 270 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 TRAT1Q6PIZ9 186 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 MRGPRFQ96AM1 343 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 PRSS44E7EML9 344 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 OR2H2O95918 312 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 HLA-DRB3P79483 266 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 OR52L2PQ8NGH6 319 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 RPUSD4Q96CM3 377 aaKnown RBP11.83□□□□□ -0.52
SMC6-201ENST00000351948 GNPNAT1Q96EK6 184 aaPredicted RBP11.83□□□□□ -0.52
SMC6-201ENST00000351948 NEURL2Q9BR09 285 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 HES4Q9HCC6 221 aa11.83□□□□□ -0.52
SMC6-201ENST00000351948 RPL36A-HNRNPH2H7BZ11 118 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 DUS4LO95620 317 aaKnown RBP11.82□□□□□ -0.52
SMC6-201ENST00000351948 Q0VFX4 171 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 OR8G5Q8NG78 346 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 TMEM54Q969K7 222 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 NIPSNAP3BQ9BS92 247 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 RNF115Q9Y4L5 304 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 A0A087WV48 116 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 TAAR5O14804 337 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 MST1P26927 711 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 IFITM3Q01628 133 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 IGFBP7Q16270 282 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 OR4F5Q8NH21 305 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 WDYHV1Q96HA8 205 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 OR4F4Q96R69 305 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 NPTNQ9Y639 398 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 FREM3P0C091 2139 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 ICMTO60725 284 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 LHX2P50458 406 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 TMEM255AQ5JRV8 349 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 ZNF680Q8NEM1 530 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 MITD1Q8WV92 249 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 ST8SIA2Q92186 375 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 ABHD14BQ96IU4 210 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 ZNF426Q9BUY5 554 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 PLXNA4Q9HCM2 1894 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 SCTP09683 121 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 CECR9P0C854 216 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 PRF1P14222 555 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 RCC1P18754 421 aaPredicted RBP11.82□□□□□ -0.52
SMC6-201ENST00000351948 CLDN18P56856 261 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 SSX2Q16385 188 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 Q56UQ5 140 aa11.82□□□□□ -0.52
SMC6-201ENST00000351948 FAHD2BQ6P2I3 314 aaPredicted RBP11.82□□□□□ -0.52
SMC6-201ENST00000351948 TGIF2LYQ8IUE0 185 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms