RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PHF1O43189 567 aaPredicted RBP15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 LPLP06858 475 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 FCGR3AP08637 254 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 P2RX3P56373 397 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 EDDM3BP56851 147 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 PAX5Q02548 391 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 LRRC10Q5BKY1 277 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 ZNF880Q6PDB4 577 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 GDPD3Q7L5L3 318 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 TCF23Q7RTU1 214 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 GDPD1Q8N9F7 314 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 C15orf40Q8WUR7 153 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 TRIM63Q969Q1 353 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 SCPEP1Q9HB40 452 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 CHMP1AQ9HD42 196 aaPredicted RBP15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 C12orf4Q9NQ89 552 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 C19orf12Q9NSK7 152 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 ANAPC10Q9UM13 185 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 PRRC2AP48634 2157 aaKnown RBP15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 MALRD1Q5VYJ5 2156 aa15.73■□□□□ 0.11
CHMP4A-201ENST00000347519 ABCA2Q9BZC7 2435 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 MEIKINA0A087WXM9 373 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 TRBV6-6A0A0A6YYG2 114 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 ODAMA1E959 279 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 SULT1C2O00338 296 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 RCC1P18754 421 aaPredicted RBP15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 CD40LGP29965 261 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 OR13A1Q8NGR1 328 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 SETD6Q8TBK2 473 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 FCAMRQ8WWV6 532 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 OCSTAMPQ9BR26 566 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 THAP7Q9BT49 309 aaPredicted RBP15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 Q9N2K0 584 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 MTFP1Q9UDX5 166 aa15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 RBMX2Q9Y388 322 aaKnown RBP15.72■□□□□ 0.11
CHMP4A-201ENST00000347519 KIAA1324LA8MWY0 1029 aaPredicted RBP15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 ORC5O43913 435 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 SLC25A16P16260 332 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 ZFP36P26651 326 aaKnown RBP15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 ERP29P30040 261 aaKnown RBP15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 MRPS10P82664 201 aaKnown RBP15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 IFITM3Q01628 133 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 OR52W1Q6IF63 320 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 PRSS57Q6UWY2 283 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 NLRC3Q7RTR2 1065 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 H1FXQ92522 213 aaKnown RBP15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 SNAPC3Q92966 411 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 Q96MF0 132 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 FOXC2Q99958 501 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 ST6GALNAC5Q9BVH7 336 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 CLN8Q9UBY8 286 aa15.71■□□□□ 0.11
CHMP4A-201ENST00000347519 CR1P17927 2039 aa15.71■□□□□ 0.1
CHMP4A-201ENST00000347519 YLPM1P49750 1951 aaKnown RBP15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 C22orf46C9J442 243 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 FAM157AC9JC47 383 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 IL7P13232 177 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 DTYMKP23919 212 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 GDNFP39905 211 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 BTN2A1Q7KYR7 527 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 HOGA1Q86XE5 327 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 UBALD1Q8TB05 177 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 MRGPRDQ8TDS7 321 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 MBNL3Q9NUK0 354 aaKnown RBP15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 TRAPPC2LQ9UL33 140 aa15.7■□□□□ 0.1
CHMP4A-201ENST00000347519 NAT1P18440 290 aa15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 GNB2P62879 340 aa15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 MRPS15P82914 257 aaKnown RBP15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 ZNF273Q14593 569 aa15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 LYSMD2Q8IV50 215 aa15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 WFDC11Q8NEX6 87 aa15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 SSBP3Q9BWW4 388 aaPredicted RBP15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 RIMS4Q9H426 269 aaPredicted RBP15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 MED13LQ71F56 2210 aa15.69■□□□□ 0.1
CHMP4A-201ENST00000347519 RNF223E7ERA6 249 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 RBBP9O75884 186 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 CGB3P0DN86 165 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 CGB7P0DN87 165 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 USF1P22415 310 aaPredicted RBP15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 GLP1RP43220 463 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 CBX5P45973 191 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 RPL31P62899 125 aaKnown RBP15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 ESCO2Q56NI9 601 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 TMEM200BQ69YZ2 307 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 MAPK1IP1LQ8NDC0 245 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 CCDC32Q9BV29 185 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 NCOR1P1Q9H4R4 102 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 IFT46Q9NQC8 304 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 ABCB10Q9NRK6 738 aa15.68■□□□□ 0.1
CHMP4A-201ENST00000347519 A0A1W2PQ09 198 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 C12orf77C9JDV5 145 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 SCTP09683 121 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 GSTT2P0CG29 244 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 GSTT2BP0CG30 244 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 RCVRNP35243 200 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 NPY4RP50391 375 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 LCN2P80188 198 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 CR1LQ2VPA4 569 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 FAM185AQ8N0U4 392 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 BEST4Q8NFU0 473 aa15.67■□□□□ 0.1
CHMP4A-201ENST00000347519 RAB39BQ96DA2 213 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms