RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 LINC01387J3KSC0 135 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 CSN3P07498 182 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 SP1P08047 785 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 HOXC4P09017 264 aaPredicted RBP15.33■□□□□ 0.04
SPAST-202ENST00000345662 PRSS12P56730 875 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 FZD5Q13467 585 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 PSG5Q15238 335 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 OR4P4Q8NGL7 312 aa15.33■□□□□ 0.04
SPAST-202ENST00000345662 HELTA6NFD8 242 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 APCSP02743 223 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 VMA21Q3ZAQ7 101 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 ZNF600Q6ZNG1 722 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 BPIFA4PQ86YQ2 179 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 OR2M7Q8NG81 312 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 FAM60AQ9NP50 221 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 F5P12259 2224 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 IGHV5-51A0A0C4DH38 117 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 SRSF10O75494 262 aaKnown RBP15.32■□□□□ 0.04
SPAST-202ENST00000345662 GPR3P46089 330 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 Q56UQ5 140 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 PCGF1Q9BSM1 259 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 DNASE2O00115 360 aaPredicted RBP15.32■□□□□ 0.04
SPAST-202ENST00000345662 CXorf67Q86X51 503 aaPredicted RBP15.32■□□□□ 0.04
SPAST-202ENST00000345662 HDHD3Q9BSH5 251 aaPredicted RBP15.32■□□□□ 0.04
SPAST-202ENST00000345662 TRGC1P0CF51 173 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 RAB7AP51149 207 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 WIPI1Q5MNZ9 446 aaPredicted RBP15.32■□□□□ 0.04
SPAST-202ENST00000345662 HSD17B10Q99714 261 aaKnown RBP15.32■□□□□ 0.04
SPAST-202ENST00000345662 OR2W1Q9Y3N9 320 aa15.32■□□□□ 0.04
SPAST-202ENST00000345662 TRBV5-7A0A0A0MS05 114 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 CXorf1O96002 111 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 PATE4P0C8F1 98 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 FAM157CP0CG43 387 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 DRD3P35462 400 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 FUT5Q11128 374 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 FNDC7Q5VTL7 733 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 BLNKQ8WV28 456 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 MFRPQ9BY79 579 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 LRRC3CA6NJW4 275 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 ATRAIDQ6UW56 229 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 OR1L3Q8NH93 324 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 AQP3Q92482 292 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 TP53RKQ96S44 253 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 MPC1Q9Y5U8 109 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 SHISA3A0PJX4 238 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 SLC22A20A6NK97 555 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 LINC00587B1AMM8 73 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 HRKO00198 91 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 UPK3AO75631 287 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 PNLIPP16233 465 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 MEF2BQ02080 365 aaPredicted RBP15.31■□□□□ 0.04
SPAST-202ENST00000345662 ZNF343Q6P1L6 599 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 LILRA6Q6PI73 481 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 OR4F17Q8NGA8 305 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 GPBAR1Q8TDU6 330 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 R3HDM4Q96D70 268 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 SLC2A8Q9NY64 477 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 GALNSP34059 522 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 ANKRD55Q3KP44 614 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 PIGYQ3MUY2 71 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 C1orf100Q5SVJ3 147 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 OR4A47Q6IF82 309 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 C16orf47Q6ZP98 133 aaPredicted RBP15.31■□□□□ 0.04
SPAST-202ENST00000345662 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.31■□□□□ 0.04
SPAST-202ENST00000345662 WDFY1Q8IWB7 410 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 P2RX4Q99571 388 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 RNF24Q9Y225 148 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 YBX2Q9Y2T7 364 aaKnown RBP15.31■□□□□ 0.04
SPAST-202ENST00000345662 KCNMB2Q9Y691 235 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 HOXB1P14653 301 aaPredicted RBP15.31■□□□□ 0.04
SPAST-202ENST00000345662 ID4P47928 161 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 RND3P61587 244 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 TGIF2LXQ8IUE1 241 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 LYG1Q8N1E2 194 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 D2HGDHQ8N465 521 aa15.31■□□□□ 0.04
SPAST-202ENST00000345662 IGHV3-43A0A0B4J1X8 118 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 DANCRP0C864 163 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 IGHV3-43DP0DP04 118 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 RBPJQ06330 500 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 OR1C1Q15619 314 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 APCDD1LQ8NCL9 501 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 CBLN4Q9NTU7 201 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 CD82P27701 267 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 PPP1CCP36873 323 aaKnown RBP15.3■□□□□ 0.04
SPAST-202ENST00000345662 ANKRD37Q7Z713 158 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 SSMEM1Q8WWF3 244 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 UQCR10Q9UDW1 63 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 HSPB8Q9UJY1 196 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 PROCRQ9UNN8 238 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 PRF1P14222 555 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 SPATA45Q537H7 98 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 SPNS3Q6ZMD2 512 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 ZNF665Q9H7R5 613 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 LY75O60449 1722 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 IFITM10A6NMD0 228 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 MRGPRDQ8TDS7 321 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 RARRES2Q99969 163 aa15.3■□□□□ 0.04
SPAST-202ENST00000345662 MT-ND6P03923 174 aa15.29■□□□□ 0.04
SPAST-202ENST00000345662 FCGR3AP08637 254 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms