RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 AHSA2Q719I0 299 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 MS4A15Q8N5U1 240 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 KLHDC1Q8N7A1 406 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 NKAIN3Q8N8D7 197 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 SUMF2Q8NBJ7 301 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 BPIFB6Q8NFQ5 453 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 NKX3-1Q99801 234 aaPredicted RBP16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 ZNF286AQ9HBT8 521 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 SERTAD4Q9NUC0 356 aa16.1■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A10PA6NDY2 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A18PA6NE21 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A16PA6NEW6 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A20PA6NIJ5 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A7PA6NKC0 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A12PA8MX19 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A5PA8MXJ8 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A23PA8MXZ1 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 M0QZK8 103 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 CSF1P09603 554 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A15PP0C7V4 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A13PP0C7W8 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A14PP0C7W9 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 FAM90A24PP0C7X0 464 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 CELP19835 753 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 GLP1RP43220 463 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 TPTE2P1Q5T6R2 138 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 OR10K1Q8NGX5 313 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 MYDGFQ969H8 173 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 DERL3Q96Q80 235 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 UQCC2Q9BRT2 126 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 MND1Q9BWT6 205 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 MMP28Q9H239 520 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 RAB9BQ9NP90 201 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 IDI2-AS1Q9NZ38 188 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 GHRLQ9UBU3 117 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 SIGLEC9Q9Y336 463 aa16.09■□□□□ 0.17
CEACAM3-201ENST00000344550 TMEM30CPA0ZSE6 113 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 GLAP06280 429 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 CDK1P06493 297 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 GPR50Q13585 617 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 RBM39Q14498 530 aaKnown RBP16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 TMEM30BQ3MIR4 351 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 TMEM219Q86XT9 240 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 THNSL2Q86YJ6 484 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 OR52M1Q8NGK5 317 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 OR13A1Q8NGR1 328 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 OR13C5Q8NGS8 318 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 CAPSLQ8WWF8 208 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 OR14A2Q96R54 314 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 WNT10AQ9GZT5 417 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 SCN3BQ9NY72 215 aa16.08■□□□□ 0.16
CEACAM3-201ENST00000344550 TRAV8-7A0A075B6U6 113 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 J3QR06 171 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 HSPB6O14558 160 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 GEMIN2O14893 280 aaKnown RBP16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 ORC5O43913 435 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 CA11O75493 328 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 OR2F2O95006 317 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 SERPINA2P20848 420 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 GDNFP39905 211 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 EMX1Q04741 257 aaPredicted RBP16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 Q3ZCU0 254 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 SLC22A6Q4U2R8 563 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 C6orf141Q5SZD1 244 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 ZFP41Q8N8Y5 198 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 C8orf31Q8N9H6 132 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 WIPF2Q8TF74 440 aaPredicted RBP16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 ING3Q9NXR8 418 aa16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 MRPS28Q9Y2Q9 187 aaKnown RBP16.07■□□□□ 0.16
CEACAM3-201ENST00000344550 TET2Q6N021 2002 aaPredicted RBP16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 FAM106CPP0CH98 169 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 NFYBP25208 207 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 RAB7AP51149 207 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 MADCAM1Q13477 382 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 BAIAP2L2Q6UXY1 529 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 LYPD6Q86Y78 171 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 JAGN1Q8N5M9 183 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 PLPPR1Q8TBJ4 325 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 RPEQ96AT9 228 aa16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 RBM14Q96PK6 669 aaKnown RBP16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 RCC2Q9P258 522 aaKnown RBP16.06■□□□□ 0.16
CEACAM3-201ENST00000344550 NOTCH1P46531 2555 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 PEX14O75381 377 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 VSIG10L2P0DP72 767 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 GLIPR1L1Q6UWM5 242 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 UNQ9370/PRO34162Q6UXP9 181 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 ZNF497Q6ZNH5 498 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 OR8H3Q8N146 312 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 MRGPRDQ8TDS7 321 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 PHYHIPQ92561 330 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 VCX3BQ9H321 246 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 PSG11Q9UQ72 335 aa16.05■□□□□ 0.16
CEACAM3-201ENST00000344550 FAM90A9PA6NNJ1 464 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 MCRIP1C9JLW8 97 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 FBXO24O75426 580 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 TSPAN15O95858 294 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 UBBP0CG47 229 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 BLCAPP62952 87 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 SPHARQ15513 63 aa16.04■□□□□ 0.16
CEACAM3-201ENST00000344550 ATAD3CQ5T2N8 411 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms