RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PRR18Q8N4B5 295 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 UBAC2Q8NBM4 344 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 DMBX1Q8NFW5 382 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 UBALD1Q8TB05 177 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 IL1F10Q8WWZ1 152 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 BCL2L2Q92843 193 aaPredicted RBP12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 IP6K3Q96PC2 410 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 ESPL1Q14674 2120 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 A0A1B0GV50 99 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 NUDT19A8MXV4 375 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 C9JQL5 133 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 ADAM20O43506 726 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 SSSCA1O60232 199 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 WISP2O76076 250 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 SFTA3P0C7M3 94 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 ERVS71-1P61550 626 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 CLINT1Q14677 625 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 GNMTQ14749 295 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 AKIRIN2Q53H80 203 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 ZNF573Q86YE8 665 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM58AQ8N1B3 248 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 OR4D5Q8NGN0 318 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 BORCS7-ASMTA0A0B4J1R7 106 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM24AA6NFZ4 105 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 SLC34A2O95436 690 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 IDH3GP51553 393 aaPredicted RBP12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 BTNL8Q6UX41 500 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 POMT1Q9Y6A1 747 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 ATP23Q9Y6H3 246 aa12.7□□□□□ -0.38
VIPAS39-202ENST00000343765 KIR2DS1A0A191URI9 304 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 TPD52L2O43399 206 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 LYZL6O75951 148 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 KIR2DS4P43632 304 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 F2RL1P55085 397 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 IL13RA2Q14627 380 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 CXorf66Q5JRM2 361 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 NANOS1Q8WY41 292 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 CARHSP1Q9Y2V2 147 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 TNRC6AQ8NDV7 1962 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 PRH1P02810 166 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 NFYBP25208 207 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 NKX2-1P43699 371 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 P2RY1P47900 373 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 KCNJ3P48549 501 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 TRIP6Q15654 476 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 MIDNQ504T8 468 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 SELENOHQ8IZQ5 122 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 OPA3Q9H6K4 179 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 PARP11Q9NR21 331 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM212BQ9NTI7 297 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 MPC1Q9Y5U8 109 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 RFNGQ9Y644 331 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 MED12LQ86YW9 2145 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 SELEP16581 610 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 CCL11P51671 97 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 EWSR1Q01844 656 aaKnown RBP eCLIP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM185AQ8N0U4 392 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 OR51H1Q8NH63 302 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 LILRB1Q8NHL6 650 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 KIRREL1Q96J84 757 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 SEC11CQ9BY50 192 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 OR2J1Q9GZK6 312 aa12.69□□□□□ -0.38
VIPAS39-202ENST00000343765 OR5B21A6NL26 309 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 SIRPB1O00241 398 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 NKX2-8O15522 239 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 TSPAN15O95858 294 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 SRPXP78539 464 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 TBC1D28Q2M2D7 210 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 GPR157Q5UAW9 335 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 Q6ZS49 121 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 SPAG16Q8N0X2 631 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 DLL3Q9NYJ7 618 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 DMXL2Q8TDJ6 3036 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 DEGS1O15121 323 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 EPHA1P21709 976 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 CAMLGP49069 296 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 ALKBH6Q3KRA9 238 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 C10orf91Q5T1B1 145 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 TMEM178AQ8NBL3 297 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 BOD1Q96IK1 185 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 OR51I2Q9H344 312 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 ZFP57Q9NU63 452 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
VIPAS39-202ENST00000343765 TUSC2O75896 110 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 SNAPINO95295 136 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 PPT1P50897 306 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 SOX8P57073 446 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 TMEM182Q6ZP80 229 aaPredicted RBP12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 WDR86Q86TI4 376 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 CMTM1Q8IZ96 169 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 OR2C3Q8N628 320 aa12.67□□□□□ -0.38
VIPAS39-202ENST00000343765 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms