RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PCDHB16Q9NRJ7 776 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 OR6C3Q9NZP0 311 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 RCC2Q9P258 522 aaKnown RBP12.46□□□□□ -0.41
VAPA-201ENST00000340541 VPREB3Q9UKI3 123 aa12.46□□□□□ -0.41
VAPA-201ENST00000340541 TBL2Q9Y4P3 447 aaKnown RBP12.46□□□□□ -0.41
VAPA-201ENST00000340541 MEIKINA0A087WXM9 373 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 ZNF729A6NN14 1252 aaPredicted RBP12.45□□□□□ -0.42
VAPA-201ENST00000340541 H3BUX3 64 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 MGMTP16455 207 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 PSMA1P25786 263 aaKnown RBP12.45□□□□□ -0.42
VAPA-201ENST00000340541 RAG2P55895 527 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 LGALS4P56470 323 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 FABP5Q01469 135 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 DEFA6Q01524 100 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 TRAM1Q15629 374 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 OLFML2AQ68BL7 652 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 OR5R1Q8NH85 324 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 CYYR1Q96J86 154 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 Q96M66 194 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 SSX3Q99909 188 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 BARHL1Q9BZE3 327 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 BANF2Q9H503 90 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 LINC00574Q9H8X3 128 aa12.45□□□□□ -0.42
VAPA-201ENST00000340541 A0A087X0M5 115 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 KBTBD11-OT1A0A1B0GTJ5 212 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 A0A1B0GX30 115 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 CLPSL1A2RUU4 121 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 VGLL3A8MV65 326 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 SLC22A1O15245 554 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 CD34P28906 385 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 GABRA5P31644 462 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 LRRC75BQ2VPJ9 315 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 ATAD3CQ5T2N8 411 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 SIGIRRQ6IA17 410 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 SLC35E4Q6ICL7 350 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 OR4P4Q8NGL7 312 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
VAPA-201ENST00000340541 MALSU1Q96EH3 234 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 CITED1Q99966 193 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 CLEC7AQ9BXN2 247 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 YTHDF1Q9BYJ9 559 aaKnown RBP12.44□□□□□ -0.42
VAPA-201ENST00000340541 SELENOIQ9C0D9 397 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 ZNF286AQ9HBT8 521 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 GHRLQ9UBU3 117 aa12.44□□□□□ -0.42
VAPA-201ENST00000340541 TRAV39A0A0B4J263 110 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM172BPA6NC97 362 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A10PA6NDY2 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A18PA6NE21 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A16PA6NEW6 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A20PA6NIJ5 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A7PA6NKC0 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A22PA8MWA6 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A12PA8MX19 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A5PA8MXJ8 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A23PA8MXZ1 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 NPIPB11E5RHQ5 1161 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 TIMM23O14925 209 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
VAPA-201ENST00000340541 IGLV1-47P01700 117 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A15PP0C7V4 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A13PP0C7W8 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A14PP0C7W9 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM90A24PP0C7X0 464 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 GLP1RP43220 463 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 DYNC1I2Q13409 638 aaKnown RBP12.43□□□□□ -0.42
VAPA-201ENST00000340541 MINOS1Q5TGZ0 78 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 UBE2UQ5VVX9 321 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 GLT8D1Q68CQ7 371 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 OR52W1Q6IF63 320 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 GDPGP1Q6ZNW5 385 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 ABHD12Q8N2K0 398 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 ZNF565Q8N9K5 539 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 MRGPRDQ8TDS7 321 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 FAM46BQ96A09 425 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 NDUFB11Q9NX14 153 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 CALYQ9NYX4 217 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 MINOS1-NBL1R4GNA1 71 aa12.43□□□□□ -0.42
VAPA-201ENST00000340541 TMEM30CPA0ZSE6 113 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 BTBD17A6NE02 478 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 IL1AP01583 271 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 MT-ND4P03905 459 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 UBBP0CG47 229 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 JUNBP17275 347 aaPredicted RBP12.42□□□□□ -0.42
VAPA-201ENST00000340541 SSTR5P35346 364 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 QRFPP83859 136 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 UNC119Q13432 240 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 SSX2Q16385 188 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 CD200R1LQ6Q8B3 271 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 RTN4RL2Q86UN3 420 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 GAPTQ8N292 157 aa12.42□□□□□ -0.42
VAPA-201ENST00000340541 SVOPQ8N4V2 548 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms