RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
CPSF7-201ENST00000340437 FOLR3P41439 243 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 RAB2AP61019 212 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 RSG1Q9BU20 258 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 A0A087WZY1 265 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 MRPL33O75394 65 aaKnown RBP12.39□□□□□ -0.43
CPSF7-201ENST00000340437 PPP1R3CQ9UQK1 317 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 NOSIPQ9Y314 301 aaKnown RBP12.39□□□□□ -0.43
CPSF7-201ENST00000340437 WSB1Q9Y6I7 421 aa12.39□□□□□ -0.43
CPSF7-201ENST00000340437 UBE2CO00762 179 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 TMEM50AO95807 157 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 NGFP01138 241 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 TUBG1P23258 451 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 S100A2P29034 98 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 PRDX4Q13162 271 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 RHEBQ15382 184 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 HIST1H2AAQ96QV6 131 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 LOC102725191A0A1B0GVB3 256 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 SYNGR1O43759 233 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 SERPINE2P07093 398 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 SMIM6P0DI80 62 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 ELLP55199 621 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-201ENST00000340437 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
CPSF7-201ENST00000340437 CDPF1Q6NVV7 123 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 SELENOHQ8IZQ5 122 aaKnown RBP12.38□□□□□ -0.43
CPSF7-201ENST00000340437 OR5T1Q8NG75 326 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 OR1K1Q8NGR3 316 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 HPSE2Q8WWQ2 592 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 RNF122Q9H9V4 155 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 K7N7A8 449 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 FKBP2P26885 142 aaKnown RBP12.38□□□□□ -0.43
CPSF7-201ENST00000340437 C3AR1Q16581 482 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 OR2B11Q5JQS5 317 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 RNF138Q8WVD3 245 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 PFDN5Q99471 154 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 SLC25A31Q9H0C2 315 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 ERRFI1Q9UJM3 462 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-201ENST00000340437 DOCK11Q5JSL3 2073 aa12.38□□□□□ -0.43
CPSF7-201ENST00000340437 LY6G6EA0A0G2JKS1 128 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 hCG_38984A0A1B0GV85 526 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 GJE1A6NN92 205 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 TRAPPC2LH3BP13 241 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 CST2P09228 141 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 CXCL1P09341 107 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 ZNF239Q16600 458 aaKnown RBP12.37□□□□□ -0.43
CPSF7-201ENST00000340437 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 AGBL5Q8NDL9 886 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 OR4D5Q8NGN0 318 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 U3KQA8 63 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 TOX3O15405 576 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-201ENST00000340437 KLF7O75840 302 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-201ENST00000340437 DKK1O94907 266 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 METTL15P1P0C7V9 234 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 ZNF100Q8IYN0 542 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 IMMP1LQ96LU5 166 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 TOLLIPQ9H0E2 274 aa12.37□□□□□ -0.43
CPSF7-201ENST00000340437 OR6C6A6NF89 314 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 CA11O75493 328 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 FOLR2P14207 255 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 RAB5CP51148 216 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 EXT1Q16394 746 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 RNF212Q495C1 297 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 MKXQ8IYA7 352 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 COMMD1Q8N668 190 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 NECAP1Q8NC96 275 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 SPIN2AQ99865 258 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 SPIN2BQ9BPZ2 258 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 OR2V1Q8NHB1 315 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 ARGFXA6NJG6 315 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 SLC22A20A6NK97 555 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 IFNA5P01569 189 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 TRGC2P03986 189 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 Q8WTZ3 238 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 S100PBPQ96BU1 408 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 INTS12Q96CB8 462 aaKnown RBP12.36□□□□□ -0.43
CPSF7-201ENST00000340437 C10orf35Q96D05 121 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 HES7Q9BYE0 225 aa12.36□□□□□ -0.43
CPSF7-201ENST00000340437 CELA3AP09093 270 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 PSG2P11465 335 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 S100A12P80511 92 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 CPT1CQ8TCG5 803 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 PSMF1Q92530 271 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 DOK5Q9P104 306 aa12.35□□□□□ -0.43
CPSF7-201ENST00000340437 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
CPSF7-201ENST00000340437 A0A0G2JRQ6 117 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms