RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 A0A1B0GW55 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMEM30CPA0ZSE6 113 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TRDCB7Z8K6 153 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DHFRP00374 187 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SCTP09683 121 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR5H8P0DN80 308 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SELLP14151 372 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KCNJ3P48549 501 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 BTG1P62324 171 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZMYND11Q15326 602 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TATDN3Q17R31 274 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KRBOX4Q5JUW0 171 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SLC35E4Q6ICL7 350 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMEM17Q86X19 198 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TPRX1Q8N7U7 411 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PPP1R35Q8TAP8 253 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MRGPRFQ96AM1 343 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SDSLQ96GA7 329 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GAFA1Q96PS6 74 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CCL13Q99616 98 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KIF25Q9UIL4 384 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 BOLA2-SMG1P6H3BVE0 249 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 K7N7A8 449 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 FABP7O15540 132 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LY6HO94772 140 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CDKN1AP38936 164 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 IGSF11Q5DX21 431 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TERB2Q8NHR7 220 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ALG5Q9Y673 324 aa12.31□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KIR2DS1A0A191URI9 304 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TK1P04183 234 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 RLN1P04808 185 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KIR2DS4P43632 304 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GLIPR1P48060 266 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 RAG2P55895 527 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SEC61A1P61619 476 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 KIR2DS1Q14954 304 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MOB1BQ7L9L4 216 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 FAM216BQ8N7L0 139 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 NEU4Q8WWR8 484 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF2Q9BSG1 426 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMPRSS13Q9BYE2 586 aa12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CLEC4MQ9H2X3 399 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 POM121CA8CG34 1229 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MGST3O14880 152 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PEX14O75381 377 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ANXA7P20073 488 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 HLA-DRB3P79483 266 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TLE4Q04727 773 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ATPAF1Q5TC12 328 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SP5Q6BEB4 398 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LHFPL1Q86WI0 220 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMEM185AQ8NFB2 350 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 GIMAP1Q8WWP7 306 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 LIME1Q9H400 295 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PAIP2BQ9ULR5 123 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CLEC18AA5D8T8 446 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR5H14A6NHG9 310 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 BET1O15155 118 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 NPY4RP50391 375 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 HERPUD1Q15011 391 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 AADACL3Q5VUY0 350 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DHRS11Q6UWP2 260 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CLEC18BQ6UXF7 455 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PRR18Q8N4B5 295 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 CLEC18CQ8NCF0 446 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 OR5D13Q8NGL4 314 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MARCH1Q8TCQ1 289 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 PLEKHF2Q9H8W4 249 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MYOZ1Q9NP98 299 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 DLL4Q9NR61 685 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MGAT4AQ9UM21 535 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 VSIG4Q9Y279 399 aa12.29□□□□□ -0.44
CDK5RAP3-201ENST00000338399 IGKV1-6A0A0C4DH72 117 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 MEX3AA1L020 520 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 J3QKU1 62 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 SIGLEC5O15389 551 aa12.28□□□□□ -0.44
CDK5RAP3-201ENST00000338399 RP2O75695 350 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms