RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MFAP2P55001 183 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 TMEM50BP56557 158 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 TNXAQ16473 311 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 GBGT1Q8N5D6 347 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 KLF13Q9Y2Y9 288 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 CDC42EP2O14613 210 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 MT-CO3P00414 261 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 IL2RAP01589 272 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 VSIG10L2P0DP72 767 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 PERPQ96FX8 193 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 OPN3Q9H1Y3 402 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 CDC42EP3Q9UKI2 254 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 DNASE2O00115 360 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 HBZP02008 142 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 DSCR4P56555 118 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 C21orf58P58505 322 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 CTAG1AP78358 180 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF766Q5HY98 468 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF660Q6AZW8 331 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 RPEQ96AT9 228 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 TBX21Q9UL17 535 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 TMIGD3P0DMS9 266 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 TWIST1Q15672 202 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 PRNTQ86SH4 94 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 H1FOOQ8IZA3 346 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 DEFB124Q8NES8 71 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 OR8B12Q8NGG6 310 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 OR4X1Q8NH49 305 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 C6orf106Q9H6K1 298 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-201ENST00000334504 TMEM38BQ9NVV0 291 aa8.65□□□□□ -1.02
COL4A6-201ENST00000334504 ZGLP1P0C6A0 271 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 PRSS12P56730 875 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 HFEQ30201 348 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 GRAMD2BQ96HH9 432 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 OR5AC2Q9NZP5 309 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 CACNA1SQ13698 1873 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 MPTX1A8MV57 137 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 RBPMS2Q6ZRY4 209 aaKnown RBP8.65□□□□□ -1.03
COL4A6-201ENST00000334504 OR8I2Q8N0Y5 310 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 MYEOVQ96EZ4 313 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 OR2V2Q96R30 315 aa8.65□□□□□ -1.03
COL4A6-201ENST00000334504 NUDT3O95989 172 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 VDAC1P21796 283 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 FZD5Q13467 585 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 SMDT1Q9H4I9 107 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 RUNX1Q01196 453 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 DEGS2Q6QHC5 323 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 HMGCLL1Q8TB92 370 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 MRGPRFQ96AM1 343 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 SNRNP40Q96DI7 357 aaKnown RBP8.64□□□□□ -1.03
COL4A6-201ENST00000334504 C7orf66A4D0T2 115 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 CD27P26842 260 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 VN1R2Q8NFZ6 395 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 OOEPA6NGQ2 149 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 KBTBD11O94819 623 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 PPYP01298 95 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 CCL2P13500 99 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 METAP1P53582 386 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 B4GALNT1Q00973 533 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 NAAAQ02083 359 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 IRF3Q14653 427 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 MYOZ1Q9NP98 299 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
COL4A6-201ENST00000334504 KLK13Q9UKR3 277 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 MTCH2Q9Y6C9 303 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 KCNE1BA0A087WTH5 132 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 RNASE1P07998 156 aaKnown RBP8.64□□□□□ -1.03
COL4A6-201ENST00000334504 TRGC1P0CF51 173 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 ZNF32P17041 273 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 SPINK2P20155 84 aa8.64□□□□□ -1.03
COL4A6-201ENST00000334504 HAX1O00165 279 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 NDUFS8O00217 210 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 CFDP00746 253 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 KIAA0040Q15053 153 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 LRRC29Q8WV35 223 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 ZCCHC14Q8WYQ9 949 aaKnown RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 GUCD1Q96NT3 240 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 RARRES2Q99969 163 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 SOSTQ9BQB4 213 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 TLNRD1Q9H1K6 362 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 SAP30LQ9HAJ7 183 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 SLC52A3Q9NQ40 469 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 C5P01031 1676 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 LRRC37A3O60309 1634 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 NDUFB4O95168 129 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 HOXD4P09016 255 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-201ENST00000334504 CTLA4P16410 223 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 EFNB2P52799 333 aa8.63□□□□□ -1.03
COL4A6-201ENST00000334504 EIF3IQ13347 325 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 342.9 ms