RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SFRP2Q96HF1 295 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CMTM3Q96MX0 182 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 KRTAP2-2Q9BYT5 123 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 KRTAP2-1Q9BYU5 128 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 PRRG4Q9BZD6 226 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NSRP1Q9H0G5 558 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ZCCHC4Q9H5U6 513 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 ISG20L2Q9H9L3 353 aaKnown RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 KRCC1Q9NPI7 259 aaPredicted RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 HEYLQ9NQ87 328 aaPredicted RBP1.07□□□□□ -2.24
LINC00643-201ENST00000334389 NUDT15Q9NV35 164 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 CD274Q9NZQ7 290 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 DHDHQ9UQ10 334 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 TRAF6Q9Y4K3 522 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 AKAP6Q13023 2319 aa1.07□□□□□ -2.24
LINC00643-201ENST00000334389 IGKV1D-42A0A075B6H8 117 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 IGHV4-4A0A075B6R2 117 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 hCG_38984A0A1B0GV85 526 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 A0A1W2PRG6 482 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 A0A1W2PS29 197 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 hADV38S2A0JD32 116 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PLSCR5A0PG75 271 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NPEPPSL1A6NEC2 478 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TRDCB7Z8K6 153 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 K7EQG2 157 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 WNT9BO14905 357 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PGRMC2O15173 223 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CCNB2O95067 398 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PIPP12273 146 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 BCKDHAP12694 445 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NCF1P14598 390 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM11P17152 192 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GCSHP23434 173 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MC5RP33032 325 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MDH1P40925 334 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KCNJ5P48544 419 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GSSP48637 474 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PRKAG1P54619 331 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 POLR2GP62487 172 aaKnown RBP eCLIP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CSNK2BP67870 215 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KCNJ10P78508 379 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ADARB1P78563 741 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ROM1Q03395 351 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PSG7Q13046 419 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PRDX4Q13162 271 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NAE1Q13564 534 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CEACAM7Q14002 265 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TSNQ15631 228 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC22A6Q4U2R8 563 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 C2CD6Q53TS8 623 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KCTD18Q6PI47 426 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 DLEU7Q6UYE1 221 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MOB3CQ70IA8 216 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC35D2Q76EJ3 337 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TAS2R42Q7RTR8 314 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 DCXRQ7Z4W1 244 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NANOGNBQ7Z5D8 188 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 LHFPL4Q7Z7J7 247 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GPAT4Q86UL3 456 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KLHL7Q8IXQ5 586 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 LINC00518Q8N0U6 118 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 BBS1Q8NFJ9 593 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR9G1Q8NH87 305 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR2W6PQ8NHA6 318 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SETD6Q8TBK2 473 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RPL3LQ92901 407 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 C3orf49Q96BT1 292 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SPDL1Q96EA4 605 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CHMP6Q96FZ7 201 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 C16orf58Q96GQ5 468 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR14A2Q96R54 314 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CIB1Q99828 191 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RTL8AQ9BWD3 113 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TUBB1Q9H4B7 451 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GLIPR2Q9H4G4 154 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MAP6D1Q9H9H5 199 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PLGRKTQ9HBL7 147 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PLCXD1Q9NUJ7 323 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 COA4Q9NYJ1 87 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TXNDC16Q9P2K2 825 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 BAG5Q9UL15 447 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KIAA2026Q5HYC2 2103 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 BRCA2P51587 3418 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 XIRP2A4UGR9 3374 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 IGLV2-18A0A075B6J9 118 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 A0A1W2PN81 502 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ZAR1LA6NP61 321 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 C15orf62A8K5M9 175 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MGST3O14880 152 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PRKYO43930 277 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 EDF1O60869 148 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CHRM4P08173 479 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SPI1P17947 270 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PSMB9P28065 219 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 AQP1P29972 269 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC7A1P30825 629 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CHRNA7P36544 502 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SSR2P43308 183 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MAGEB1P43366 347 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 BCAP31P51572 246 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms