RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 COQ2Q96H96 371 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 ABHD1Q96SE0 405 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 PECRQ9BY49 303 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 ABCG5Q9H222 651 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 LPAR2Q9HBW0 351 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 ETV7Q9Y603 341 aa13.71□□□□□ -0.21
SHOX-201ENST00000334060 FAM157AC9JC47 383 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 RNF223E7ERA6 249 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 CSF3P09919 207 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 MUC1P15941 1255 aaPredicted RBP13.71□□□□□ -0.22
SHOX-201ENST00000334060 RAB6AP20340 208 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 ZFP36P26651 326 aaKnown RBP13.71□□□□□ -0.22
SHOX-201ENST00000334060 CAPZA1P52907 286 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 AESQ08117 197 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 HACD4Q5VWC8 232 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 MMP28Q9H239 520 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 RASL12Q9NYN1 266 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 RCC2Q9P258 522 aaKnown RBP13.71□□□□□ -0.22
SHOX-201ENST00000334060 HSPB11Q9Y547 144 aa13.71□□□□□ -0.22
SHOX-201ENST00000334060 TRAV38-1A0A0B4J264 116 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 DVL1O14640 695 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 CPT2P23786 658 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 LMO4P61968 165 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 GPR176Q14439 515 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 CLLU1Q5K131 121 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 UTF1Q5T230 341 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 ACOT12Q8WYK0 555 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 DPCDQ9BVM2 203 aaPredicted RBP13.7□□□□□ -0.22
SHOX-201ENST00000334060 AUNIPQ9H7T9 357 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 ZNF230Q9UIE0 474 aaPredicted RBP13.7□□□□□ -0.22
SHOX-201ENST00000334060 AK3Q9UIJ7 227 aa13.7□□□□□ -0.22
SHOX-201ENST00000334060 CR1P17927 2039 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 MFNGO00587 321 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 SIGLEC5O15389 551 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 GLIPR1P48060 266 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 TAS2R20P59543 309 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 IL13RA2Q14627 380 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 ZNF260Q3ZCT1 412 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
SHOX-201ENST00000334060 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 TCF23Q7RTU1 214 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 RAB1CQ92928 201 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 NINJ1Q92982 152 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 SDSLQ96GA7 329 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 DIRAS2Q96HU8 199 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 SH2D1BO14796 132 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 SSX5O60225 188 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 PDCD6O75340 191 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 WNT2P09544 360 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 RPS2P15880 293 aaKnown RBP13.69□□□□□ -0.22
SHOX-201ENST00000334060 RAB14P61106 215 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 CDNFQ49AH0 187 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 TEX261Q6UWH6 196 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 OR8H1Q8NGG4 311 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 ST8SIA4Q92187 359 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 PTX4Q96A99 478 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 RAB3CQ96E17 227 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 URM1Q9BTM9 101 aaKnown RBP13.69□□□□□ -0.22
SHOX-201ENST00000334060 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
SHOX-201ENST00000334060 ZC4H2Q9NQZ6 224 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 ALG5Q9Y673 324 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 U3KQ87 197 aa13.69□□□□□ -0.22
SHOX-201ENST00000334060 IGKV1D-8A0A087WSZ0 117 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 FAM240BA0A1B0GVZ2 78 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 IGHV2-5P01817 119 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 TK1P04183 234 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
SHOX-201ENST00000334060 GRK1Q15835 563 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 MZT2AQ6P582 158 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 Q6ZTK2 550 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 C9orf62Q8N4C0 152 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 GVQW1Q8N7I0 195 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 OR4K15Q8NH41 348 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 CCDC107Q8WV48 283 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 ZNF665Q9H7R5 613 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 C19orf12Q9NSK7 152 aa13.68□□□□□ -0.22
SHOX-201ENST00000334060 RABL2AQ9UBK7 228 aaPredicted RBP13.68□□□□□ -0.22
SHOX-201ENST00000334060 C22orf46C9J442 243 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 K7N7A8 449 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 LMO1P25800 156 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 TMEM69Q5SWH9 247 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 ATPAF1Q5TC12 328 aaPredicted RBP13.67□□□□□ -0.22
SHOX-201ENST00000334060 LAMTOR1Q6IAA8 161 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 PEG10Q86TG7 708 aaKnown RBP13.67□□□□□ -0.22
SHOX-201ENST00000334060 LRRC75A-AS1Q8N1F1 130 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 MRPS24Q96EL2 167 aaKnown RBP13.67□□□□□ -0.22
SHOX-201ENST00000334060 TIMD4Q96H15 378 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 PLEKHJ1Q9NW61 149 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 PLA2G10O15496 165 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 LANCL1O43813 399 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 NDUFB7P17568 137 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 FUT3P21217 361 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 EDDM3BP56851 147 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 IL13RA1P78552 427 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 LCN2P80188 198 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
SHOX-201ENST00000334060 BAIAP2L2Q6UXY1 529 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms