RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 POC1AQ8NBT0 407 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 MRPL30Q8TCC3 161 aaKnown RBP12.28□□□□□ -0.44
EPHB3-201ENST00000330394 RHBDD1Q8TEB9 315 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 TMEM204Q9BSN7 226 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 CBLN4Q9NTU7 201 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 PHF3Q92576 2039 aaKnown RBP12.28□□□□□ -0.44
EPHB3-201ENST00000330394 SH2D1BO14796 132 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 TMEM183BQ1AE95 376 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 KHDC3LQ587J8 217 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 ARTNQ5T4W7 220 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
EPHB3-201ENST00000330394 MYLKQ15746 1914 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 NDUFS6O75380 124 aaKnown RBP12.28□□□□□ -0.44
EPHB3-201ENST00000330394 OR10J4P0C629 311 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 PLGLAQ15195 96 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 HLA-BQ31612 363 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 RTL8AQ9BWD3 113 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 G6PC2Q9NQR9 355 aa12.28□□□□□ -0.44
EPHB3-201ENST00000330394 CENPFP49454 3210 aa12.27□□□□□ -0.44
EPHB3-201ENST00000330394 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
EPHB3-201ENST00000330394 NPIPB9F8W1W9 429 aa12.27□□□□□ -0.44
EPHB3-201ENST00000330394 DANCRP0C864 163 aa12.27□□□□□ -0.44
EPHB3-201ENST00000330394 CA6P23280 308 aa12.27□□□□□ -0.44
EPHB3-201ENST00000330394 GPR12P47775 334 aa12.27□□□□□ -0.44
EPHB3-201ENST00000330394 CDC34P49427 236 aaPredicted RBP12.27□□□□□ -0.44
EPHB3-201ENST00000330394 ZNF385AQ96PM9 386 aaKnown RBP12.27□□□□□ -0.44
EPHB3-201ENST00000330394 RLFQ13129 1914 aa12.27□□□□□ -0.44
EPHB3-201ENST00000330394 C11orf94C9JXX5 98 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 FCGR3AP08637 254 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 GLB1P16278 677 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 CCR5P51681 352 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 CASP6P55212 293 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 C1QL2Q7Z5L3 287 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 BIVMQ86UB2 503 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 RIMS4Q9H426 269 aaPredicted RBP12.27□□□□□ -0.45
EPHB3-201ENST00000330394 IGHV3-43A0A0B4J1X8 118 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 B4DEV8 164 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 RAMP1O60894 148 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 SMIM10L1P0DMW3 83 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 IGHV3-43DP0DP04 118 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 Q6ZN92 141 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 SMIM10Q96HG1 83 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 CHST5Q9GZS9 411 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
EPHB3-201ENST00000330394 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
EPHB3-201ENST00000330394 TCF21O43680 179 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 BCL2P10415 239 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 MST1P26927 711 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 MDH2P40926 338 aaKnown RBP12.26□□□□□ -0.45
EPHB3-201ENST00000330394 KIR2DL1P43626 348 aaPredicted RBP12.26□□□□□ -0.45
EPHB3-201ENST00000330394 CEBPEQ15744 281 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 CIB3Q96Q77 187 aaPredicted RBP12.26□□□□□ -0.45
EPHB3-201ENST00000330394 UTP23Q9BRU9 249 aaKnown RBP12.26□□□□□ -0.45
EPHB3-201ENST00000330394 ZDHHC8Q9ULC8 765 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 POLDIP2Q9Y2S7 368 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 PLXNA1Q9UIW2 1896 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 IGHV1OR21-1A0A087WYE8 117 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 TRDCB7Z8K6 153 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 PRF1P14222 555 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 MRGPRGQ86SM5 289 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 M1APQ8TC57 530 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 DOCK9Q9BZ29 2069 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 A0A1B0GTI1 187 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF729A6NN14 1252 aaPredicted RBP12.26□□□□□ -0.45
EPHB3-201ENST00000330394 RABEPKQ7Z6M1 372 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 GALMQ96C23 342 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 WNT16Q9UBV4 365 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 RALGAPA1Q6GYQ0 2036 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 A0A0G2JMZ2 1700 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 LRRC37A2A6NM11 1700 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 OR5G3P0C626 314 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 IFI44Q8TCB0 444 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 TMEM9BQ9NQ34 198 aa12.26□□□□□ -0.45
EPHB3-201ENST00000330394 CBR3O75828 277 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 GYPAP02724 150 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 PSG2P11465 335 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
EPHB3-201ENST00000330394 EXT1Q16394 746 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 CCDC74BQ96LY2 380 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 MENTQ9BUN1 341 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 KCNIP2Q9NS61 270 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 IGKV1D-43A0A0B4J1Z2 117 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 A0A1W2PQD3 144 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 TMEM14DPA8MWL7 114 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ENSAO43768 121 aaKnown RBP12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF253O75346 499 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 STPG1Q5TH74 334 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ANKRD37Q7Z713 158 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF721Q8TF20 911 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF646O15015 1829 aaPredicted RBP12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ISG15P05161 165 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 HLA-GP17693 338 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 UBE2G1P62253 170 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 SLC35B1P78383 322 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 SCGB2A2Q13296 93 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms