RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MRPL24Q96A35 216 aaKnown RBP7.01□□□□□ -1.29
CIITA-201ENST00000324288 TRGV5A0A0B4J1U4 118 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 CYC1P08574 325 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 EDARADDQ8WWZ3 215 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 MUC1P15941 1255 aaPredicted RBP7.01□□□□□ -1.29
CIITA-201ENST00000324288 CLEC18BQ6UXF7 455 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 OR2I1PQ8NGU4 316 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 IL36GQ9NZH8 169 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 CHST1O43916 411 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 BMI1P35226 326 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 GUCA2BQ16661 112 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 BSXQ3C1V8 233 aa7.01□□□□□ -1.29
CIITA-201ENST00000324288 SEBOXQ9HB31 216 aaPredicted RBP7.01□□□□□ -1.29
CIITA-201ENST00000324288 SOX21Q9Y651 276 aaPredicted RBP7.01□□□□□ -1.29
CIITA-201ENST00000324288 CORTO00230 105 aa7□□□□□ -1.29
CIITA-201ENST00000324288 VAMP5O95183 116 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TMIGD3P0DMS9 266 aaPredicted RBP7□□□□□ -1.29
CIITA-201ENST00000324288 OR10J1P30954 320 aa7□□□□□ -1.29
CIITA-201ENST00000324288 ERVFRD-1P60508 538 aa7□□□□□ -1.29
CIITA-201ENST00000324288 RPL30P62888 115 aaKnown RBP7□□□□□ -1.29
CIITA-201ENST00000324288 FOXJ2Q9P0K8 574 aa7□□□□□ -1.29
CIITA-201ENST00000324288 PPIL1Q9Y3C6 166 aa7□□□□□ -1.29
CIITA-201ENST00000324288 THBS4P35443 961 aa7□□□□□ -1.29
CIITA-201ENST00000324288 KLRB1Q12918 225 aa7□□□□□ -1.29
CIITA-201ENST00000324288 UBE2V2Q15819 145 aa7□□□□□ -1.29
CIITA-201ENST00000324288 DGAT2L7PQ6IED9 249 aa7□□□□□ -1.29
CIITA-201ENST00000324288 LRRC29Q8WV35 223 aa7□□□□□ -1.29
CIITA-201ENST00000324288 APOBEC3DQ96AK3 386 aaPredicted RBP7□□□□□ -1.29
CIITA-201ENST00000324288 PCGF1Q9BSM1 259 aa7□□□□□ -1.29
CIITA-201ENST00000324288 CTNNBIP1Q9NSA3 81 aaPredicted RBP7□□□□□ -1.29
CIITA-201ENST00000324288 FRG2CA6NGY1 282 aa7□□□□□ -1.29
CIITA-201ENST00000324288 MICBQ29980 383 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TMEFF2Q9UIK5 374 aaPredicted RBP7□□□□□ -1.29
CIITA-201ENST00000324288 IGHV3OR15-7A0A075B7D8 119 aa7□□□□□ -1.29
CIITA-201ENST00000324288 RSG1Q9BU20 258 aa7□□□□□ -1.29
CIITA-201ENST00000324288 RASL12Q9NYN1 266 aa7□□□□□ -1.29
CIITA-201ENST00000324288 VAX2Q9UIW0 290 aa7□□□□□ -1.29
CIITA-201ENST00000324288 C3orf85A0A1B0GTC6 90 aa7□□□□□ -1.29
CIITA-201ENST00000324288 PAGE4O60829 102 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TRGC2P03986 189 aa7□□□□□ -1.29
CIITA-201ENST00000324288 PGA3P0DJD8 388 aa7□□□□□ -1.29
CIITA-201ENST00000324288 WNT5AP41221 380 aa7□□□□□ -1.29
CIITA-201ENST00000324288 RIGQ13278 110 aa7□□□□□ -1.29
CIITA-201ENST00000324288 WDR25Q64LD2 544 aaPredicted RBP7□□□□□ -1.29
CIITA-201ENST00000324288 DOLPP1Q86YN1 238 aa7□□□□□ -1.29
CIITA-201ENST00000324288 OR10AC1Q8NH08 325 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TOX2Q96NM4 488 aa7□□□□□ -1.29
CIITA-201ENST00000324288 SLC17A2O00624 439 aa7□□□□□ -1.29
CIITA-201ENST00000324288 PPICP45877 212 aa7□□□□□ -1.29
CIITA-201ENST00000324288 KISS1Q15726 138 aa7□□□□□ -1.29
CIITA-201ENST00000324288 ECSCRQ19T08 205 aa7□□□□□ -1.29
CIITA-201ENST00000324288 NUFIP2Q7Z417 695 aaKnown RBP7□□□□□ -1.29
CIITA-201ENST00000324288 MRGPRX4Q96LA9 322 aa7□□□□□ -1.29
CIITA-201ENST00000324288 FOXC2Q99958 501 aa7□□□□□ -1.29
CIITA-201ENST00000324288 LPAR2Q9HBW0 351 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TAAR3PQ9P1P4 343 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TNXAQ16473 311 aa7□□□□□ -1.29
CIITA-201ENST00000324288 DDX60LQ5H9U9 1706 aaKnown RBP7□□□□□ -1.29
CIITA-201ENST00000324288 AGRNO00468 2067 aa7□□□□□ -1.29
CIITA-201ENST00000324288 RTL10Q7L3V2 364 aa7□□□□□ -1.29
CIITA-201ENST00000324288 PDPNQ86YL7 162 aa7□□□□□ -1.29
CIITA-201ENST00000324288 LINC00862A6NCI5 91 aa7□□□□□ -1.29
CIITA-201ENST00000324288 OOEPA6NGQ2 149 aa7□□□□□ -1.29
CIITA-201ENST00000324288 C2CD4DB7Z1M9 353 aa7□□□□□ -1.29
CIITA-201ENST00000324288 SOCS1O15524 211 aa7□□□□□ -1.29
CIITA-201ENST00000324288 ZFPL1O95159 310 aa7□□□□□ -1.29
CIITA-201ENST00000324288 BTF3P20290 206 aaKnown RBP7□□□□□ -1.29
CIITA-201ENST00000324288 PSG5Q15238 335 aa7□□□□□ -1.29
CIITA-201ENST00000324288 PRSS54Q6PEW0 395 aa7□□□□□ -1.29
CIITA-201ENST00000324288 AMER3Q8N944 861 aa7□□□□□ -1.29
CIITA-201ENST00000324288 DOK1Q99704 481 aa7□□□□□ -1.29
CIITA-201ENST00000324288 MMP25Q9NPA2 562 aa7□□□□□ -1.29
CIITA-201ENST00000324288 OCIAD1Q9NX40 245 aa7□□□□□ -1.29
CIITA-201ENST00000324288 CD74P04233 296 aa7□□□□□ -1.29
CIITA-201ENST00000324288 FABP2P12104 132 aa7□□□□□ -1.29
CIITA-201ENST00000324288 HIST1H1DP16402 221 aaKnown RBP7□□□□□ -1.29
CIITA-201ENST00000324288 DLX1P56177 255 aa7□□□□□ -1.29
CIITA-201ENST00000324288 ADIPOQQ15848 244 aa7□□□□□ -1.29
CIITA-201ENST00000324288 HFEQ30201 348 aa7□□□□□ -1.29
CIITA-201ENST00000324288 TMEM215Q68D42 235 aa7□□□□□ -1.29
CIITA-201ENST00000324288 CALHM3Q86XJ0 350 aa7□□□□□ -1.29
CIITA-201ENST00000324288 EIF4E3Q8N5X7 224 aaKnown RBP7□□□□□ -1.29
CIITA-201ENST00000324288 PECRQ9BY49 303 aa7□□□□□ -1.29
CIITA-201ENST00000324288 HELZP42694 1942 aaKnown RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 SERPINE3A8MV23 424 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 ALG1L2C9J202 215 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 ASPDHA6ND91 283 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CDX4O14627 284 aaPredicted RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 DEDDO75618 318 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 IL24Q13007 206 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 Q6ZS52 159 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 SLC17A5Q9NRA2 495 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 TBL2Q9Y4P3 447 aaKnown RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 TECTAO75443 2155 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 HAND1O96004 215 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 HMGA1P17096 107 aaKnown RBP6.99□□□□□ -1.29
CIITA-201ENST00000324288 AESQ08117 197 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 C3AR1Q16581 482 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 CALHM1Q8IU99 346 aa6.99□□□□□ -1.29
CIITA-201ENST00000324288 OR8B3Q8NGG8 313 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms