RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 FAM71E2Q8N5Q1 922 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF611Q8N823 705 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 ABHD17AQ96GS6 310 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 ZNF2Q9BSG1 426 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 ABHD14AQ9BUJ0 271 aa6.53□□□□□ -1.36
TRIM55-202ENST00000315962 FGF23Q9GZV9 251 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-202ENST00000315962 CSMD1Q96PZ7 3565 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 TRAV39A0A0B4J263 110 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 hCG_38984A0A1B0GV85 526 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 TSPAN15O95858 294 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 IGLV3-1P01715 115 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 TFF1P04155 84 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 PTAFRP25105 342 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 CD82P27701 267 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 PPP1CCP36873 323 aaKnown RBP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 BPIFB3P59826 476 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 PLP2Q04941 152 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 SRSF4Q08170 494 aaKnown RBP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 CHRFAM7AQ494W8 412 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 ZADH2Q8N4Q0 377 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF610Q8N9Z0 462 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 OR5L1Q8NGL2 311 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 UBALD1Q8TB05 177 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 PP6455Q8WZ26 134 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 RARRES2Q99969 163 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 NMES1Q9C002 83 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 OR2J1Q9GZK6 312 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 LIME1Q9H400 295 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 ST3GAL6Q9Y274 331 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 ZGRF1Q86YA3 2104 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 DCHS2Q6V1P9 2916 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 CLN5O75503 358 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 S100A9P06702 114 aaKnown RBP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 THBS4P35443 961 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 NHLH2Q02577 135 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 HNF4GQ14541 408 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF343Q6P1L6 599 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 POC1AQ8NBT0 407 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 OR11L1Q8NGX0 322 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 TMEM45BQ96B21 275 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 URM1Q9BTM9 101 aaKnown RBP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 RGCCQ9H4X1 137 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 MYOZ1Q9NP98 299 aaPredicted RBP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
TRIM55-202ENST00000315962 RALYQ9UKM9 306 aaKnown RBP6.52□□□□□ -1.37
TRIM55-202ENST00000315962 ITPR1Q14643 2758 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF891A8MT65 544 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 HS3ST1O14792 307 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SYNGR1O43759 233 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 RHBDL1O75783 438 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SNAPC5O75971 98 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 FCGR3AP08637 254 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 FAM87AP0C7U9 286 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 APLNRP35414 380 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 KIR2DL2P43627 348 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 FABP6P51161 128 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 PRDX4Q13162 271 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 MEX3BQ6ZN04 569 aaKnown RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 TMEM182Q6ZP80 229 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 FAM214BQ7L5A3 538 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 OR10AD1Q8NGE0 317 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 OR1K1Q8NGR3 316 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 EDARADDQ8WWZ3 215 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 POM121L2Q96KW2 1035 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 C2orf50Q96LR7 162 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 WFDC1Q9HC57 220 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 DOCK11Q5JSL3 2073 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 CACNA1DQ01668 2161 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF724A8MTY0 619 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 ZNF732B4DXR9 585 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 MSTNO14793 375 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 TMEM127O75204 238 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SFTPCP11686 197 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SELLP14151 372 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 PRF1P14222 555 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 RPS2P15880 293 aaKnown RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 HLA-GP17693 338 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 BCL3P20749 454 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 MDKP21741 143 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 CAMLGP49069 296 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 UBE2NP61088 152 aaKnown RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SSTP61278 116 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 PRR30Q53SZ7 412 aaPredicted RBP6.51□□□□□ -1.37
TRIM55-202ENST00000315962 C10orf91Q5T1B1 145 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 GGNBP1Q5YKI7 109 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 LYZL2Q7Z4W2 148 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 OR56B1Q8NGI3 324 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 FAM213BQ8TBF2 198 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SSC4DQ8WTU2 575 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SMIM8Q96KF7 97 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 RHOVQ96L33 236 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 PECRQ9BY49 303 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SMCO4Q9NRQ5 59 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 DKK4Q9UBT3 224 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 SLC7A11Q9UPY5 501 aa6.51□□□□□ -1.37
TRIM55-202ENST00000315962 UMAD1C9J7I0 102 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 OR8U8P0C7N1 319 aa6.5□□□□□ -1.37
TRIM55-202ENST00000315962 CD37P11049 281 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms