RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 B4GALT1P15291 398 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PLCXD3Q63HM9 321 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 RNASE11Q8TAA1 199 aaKnown RBP11.56□□□□□ -0.56
SKA3-202ENST00000314759 M1APQ8TC57 530 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PIGCQ92535 297 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 NAT6Q93015 286 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 GNPNAT1Q96EK6 184 aaPredicted RBP11.56□□□□□ -0.56
SKA3-202ENST00000314759 LURAP1Q96LR2 239 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 SPIN2AQ99865 258 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 SPIN2BQ9BPZ2 258 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 SIRT7Q9NRC8 400 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 A0A1W2PQM1 296 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 IFNA10P01566 189 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 CST2P09228 141 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PAX1P15863 534 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 DSCR4P56555 118 aaPredicted RBP11.56□□□□□ -0.56
SKA3-202ENST00000314759 PSG4Q00888 419 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 ID3Q02535 119 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PCOLCEQ15113 449 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 KRTAP27-1Q3LI81 207 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 GAPTQ8N292 157 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PLPPR1Q8TBJ4 325 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 C2orf88Q9BSF0 95 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 CALHM2Q9HA72 323 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 TMEM38BQ9NVV0 291 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 SMCO3A2RU48 225 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 C9J4A7 227 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 CHST1O43916 411 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 CASP6P55212 293 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
SKA3-202ENST00000314759 HLA-DRB3P79483 266 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 ZNF154Q13106 437 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 USF2Q15853 346 aaPredicted RBP11.55□□□□□ -0.56
SKA3-202ENST00000314759 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
SKA3-202ENST00000314759 IL22RA1Q8N6P7 574 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 FGFBP3Q8TAT2 258 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 CA5BP1Q8WTZ4 195 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 IGKV1D-13A0A0B4J2D9 117 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 IGKV1-13P0DP09 117 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 APLNRP35414 380 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 SPCS3P61009 180 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 MRPL14Q6P1L8 145 aaKnown RBP11.55□□□□□ -0.56
SKA3-202ENST00000314759 GUSBP11Q6P575 273 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 ZNF880Q6PDB4 577 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 SLC25A26Q70HW3 274 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 ZNF664Q8N3J9 261 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 ZNF611Q8N823 705 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 ALKBH3Q96Q83 286 aaPredicted RBP11.55□□□□□ -0.56
SKA3-202ENST00000314759 DKKL1Q9UK85 242 aa11.55□□□□□ -0.56
SKA3-202ENST00000314759 IGHV5-10-1A0A0J9YXX1 117 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 CLEC18AA5D8T8 446 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 A8MWP6 167 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 SCTP09683 121 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 GZMBP10144 247 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 CEACAM1P13688 526 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 DNLZQ5SXM8 178 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 SLC35E3Q7Z769 313 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 WDR5BQ86VZ2 330 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 CMTM1Q8IZ96 169 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 CLEC18CQ8NCF0 446 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 EXTL1Q92935 676 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 RBMXL1Q96E39 390 aaKnown RBP11.54□□□□□ -0.56
SKA3-202ENST00000314759 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 NEU1Q99519 415 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 WASF3Q9UPY6 502 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 TCAPO15273 167 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 GDF9O60383 454 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 PAX9P55771 341 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 RAC1P63000 192 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 TLE4Q04727 773 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 BAXQ07812 192 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 OR8G1Q15617 311 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 CYB5R2Q6BCY4 276 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 WNT5BQ9H1J7 359 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 RNF115Q9Y4L5 304 aa11.54□□□□□ -0.56
SKA3-202ENST00000314759 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 TK1P04183 234 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 SRFP11831 508 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 VDAC1P21796 283 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 CD200P41217 278 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 RAB11AP62491 216 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 CCL7P80098 99 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 BEND4Q6ZU67 534 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 HIPK2Q9H2X6 1198 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 MKRN2OSH3BPM6 223 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 UCP1P25874 307 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 TAS2R30P59541 319 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 TRIM61Q5EBN2 209 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 C1orf87Q8N0U7 546 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 OR5R1Q8NH85 324 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 ATP5SQ99766 215 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 OR2H1Q9GZK4 316 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 Q9N2K0 584 aa11.53□□□□□ -0.56
SKA3-202ENST00000314759 FAM86C1Q9NVL1 165 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms