RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 THEM4Q5T1C6 240 aa15.62■□□□□ 0.09
SPSB4-201ENST00000310546 PTPMT1Q8WUK0 201 aaPredicted RBP15.62■□□□□ 0.09
SPSB4-201ENST00000310546 CHST11Q9NPF2 352 aa15.62■□□□□ 0.09
SPSB4-201ENST00000310546 URB1O60287 2271 aaKnown RBP15.62■□□□□ 0.09
SPSB4-201ENST00000310546 A0A1B0GUS0 222 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 C2orf72A6NCS6 295 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 E9PLN8 166 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 FAHP16930 419 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 MSX1P28360 303 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 BRS3P32247 399 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 COTL1Q14019 142 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 ZNF100Q8IYN0 542 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 MAML2Q8IZL2 1156 aaPredicted RBP15.61■□□□□ 0.09
SPSB4-201ENST00000310546 GPHA2Q96T91 129 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 RSG1Q9BU20 258 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 RPRMQ9NS64 109 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 TNFSF10P50591 281 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 MFAP5Q13361 173 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 CST9LP1Q5W188 147 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 CRIP3Q6Q6R5 217 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 NEK7Q8TDX7 302 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 VSIRQ9H7M9 311 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 C10orf142B7Z368 130 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 ANGPTL7O43827 346 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 FAM3BP58499 235 aaPredicted RBP15.61■□□□□ 0.09
SPSB4-201ENST00000310546 TAS2R30P59541 319 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 DOK3Q7L591 496 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 GRINAQ7Z429 371 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 H1FOOQ8IZA3 346 aaPredicted RBP15.61■□□□□ 0.09
SPSB4-201ENST00000310546 GBGT1Q8N5D6 347 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 POC1BQ8TC44 478 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 RPUSD4Q96CM3 377 aaKnown RBP15.61■□□□□ 0.09
SPSB4-201ENST00000310546 MS4A10Q96PG2 267 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 ANGPTL4Q9BY76 406 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 WNT5BQ9H1J7 359 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 MOB1AQ9H8S9 216 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 PRSS50Q9UI38 385 aa15.61■□□□□ 0.09
SPSB4-201ENST00000310546 MED12Q93074 2177 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 ADAM20O43506 726 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 OR10J1P30954 320 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 TDRG1Q3Y452 100 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 CARD17Q5XLA6 110 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 ZNF695Q8IW36 515 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 SSC4DQ8WTU2 575 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 ZNF385AQ96PM9 386 aaKnown RBP15.6■□□□□ 0.09
SPSB4-201ENST00000310546 C11orf1Q9H5F2 150 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 CPAMD8Q8IZJ3 1885 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 H3BML4 177 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 CD38P28907 300 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 GABREP78334 506 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 LPAL2Q16609 132 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 RSPO4Q2I0M5 234 aaPredicted RBP15.6■□□□□ 0.09
SPSB4-201ENST00000310546 H1FNTQ75WM6 255 aaPredicted RBP15.6■□□□□ 0.09
SPSB4-201ENST00000310546 ODF3L1Q8IXM7 274 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 RBKSQ9H477 322 aa15.6■□□□□ 0.09
SPSB4-201ENST00000310546 UBE2J1Q9Y385 318 aaPredicted RBP15.6■□□□□ 0.09
SPSB4-201ENST00000310546 C3orf85A0A1B0GTC6 90 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 CDS2O95674 445 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 FOXL2P58012 376 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 BSXQ3C1V8 233 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 IL22RA2Q969J5 263 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 TM2D1Q9BX74 207 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 CHST1O43916 411 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 DDAH2O95865 285 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 IGLV3-19P01714 112 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 LCATP04180 440 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 CD82P27701 267 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 GFERP55789 205 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 PLCXD2Q0VAA5 305 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 TOMM20LQ6UXN7 152 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 UEVLDQ8IX04 471 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 TMEM256Q8N2U0 113 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 SLC46A1Q96NT5 459 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 PYGO2Q9BRQ0 406 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 PARD6AQ9NPB6 346 aa15.59■□□□□ 0.09
SPSB4-201ENST00000310546 ZNF41P51814 821 aaPredicted RBP15.58■□□□□ 0.09
SPSB4-201ENST00000310546 TMEM241Q24JQ0 296 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 SPIN3Q5JUX0 258 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 TGIF2LYQ8IUE0 185 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 ATP5SQ99766 215 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 DNAJC4Q9NNZ3 241 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 PLA2G3Q9NZ20 509 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 NAT8Q9UHE5 227 aa15.58■□□□□ 0.09
SPSB4-201ENST00000310546 CACNA1HO95180 2353 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 ALG1L2C9J202 215 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 CCR5P51681 352 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 CNN1P51911 297 aaKnown RBP15.58■□□□□ 0.08
SPSB4-201ENST00000310546 HERV-K104P61576 105 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 SSX7Q7RTT5 188 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 CALHM1Q8IU99 346 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 NAT6Q93015 286 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 PGAM5Q96HS1 289 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 PAM16Q9Y3D7 125 aa15.58■□□□□ 0.08
SPSB4-201ENST00000310546 FRG2CA6NGY1 282 aa15.57■□□□□ 0.08
SPSB4-201ENST00000310546 LRRC3CA6NJW4 275 aa15.57■□□□□ 0.08
SPSB4-201ENST00000310546 TRDCB7Z8K6 153 aa15.57■□□□□ 0.08
SPSB4-201ENST00000310546 OPN1LWP04000 364 aa15.57■□□□□ 0.08
SPSB4-201ENST00000310546 ZNF133P52736 654 aaPredicted RBP15.57■□□□□ 0.08
SPSB4-201ENST00000310546 ACOT6Q3I5F7 207 aaPredicted RBP15.57■□□□□ 0.08
SPSB4-201ENST00000310546 HLA-DQA1Q5Y7H0 255 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms