RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 TTC23Q5W5X9 447 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 CCDC144NLQ6NUI1 221 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 OSR2Q8N2R0 312 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 ZFP41Q8N8Y5 198 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 OR5AU1Q8NGC0 362 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 RFESDQ8TAC1 157 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 TMEM80Q96HE8 168 aa15.6■□□□□ 0.09
LIME1-201ENST00000309546 RBM14Q96PK6 669 aaKnown RBP15.6■□□□□ 0.09
LIME1-201ENST00000309546 DPCDQ9BVM2 203 aaPredicted RBP15.6■□□□□ 0.09
LIME1-201ENST00000309546 AMMECR1Q9Y4X0 333 aaPredicted RBP15.6■□□□□ 0.09
LIME1-201ENST00000309546 ADARB2-AS1A8MUL3 147 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 LY6LH3BQJ8 138 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 OGG1O15527 345 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 CGB3P0DN86 165 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 CGB7P0DN87 165 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 SSTR5P35346 364 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 KCNJ3P48549 501 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 RBM11P57052 281 aaKnown RBP15.59■□□□□ 0.09
LIME1-201ENST00000309546 RIPK1Q13546 671 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 ASCL4Q6XD76 172 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 SUMF2Q8NBJ7 301 aa15.59■□□□□ 0.09
LIME1-201ENST00000309546 ZNF184Q99676 751 aaPredicted RBP15.59■□□□□ 0.09
LIME1-201ENST00000309546 TGP01266 2768 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 PNMA8CA0A1B0GUJ8 204 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 OOSP1A8MZH6 123 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 J3QR06 171 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 XPNPEP2O43895 674 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 PRB2P02812 416 aaPredicted RBP15.58■□□□□ 0.08
LIME1-201ENST00000309546 RCN1Q15293 331 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 CENPVQ7Z7K6 275 aaPredicted RBP15.58■□□□□ 0.08
LIME1-201ENST00000309546 DHRSXQ8N5I4 330 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 Q8NFD4 153 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 OR52N1Q8NH53 320 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 GHSRQ92847 366 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 NCOR1P1Q9H4R4 102 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 IL36GQ9NZH8 169 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 CKLFQ9UBR5 152 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 PSG11Q9UQ72 335 aa15.58■□□□□ 0.08
LIME1-201ENST00000309546 MAGEA13PA6NCF6 341 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 GEMIN2O14893 280 aaKnown RBP15.57■□□□□ 0.08
LIME1-201ENST00000309546 SLC22A6Q4U2R8 563 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 ATAD3CQ5T2N8 411 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 DMKNQ6E0U4 476 aaPredicted RBP15.57■□□□□ 0.08
LIME1-201ENST00000309546 PACRGLQ8N7B6 248 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 OR56B4Q8NH76 319 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 NEK7Q8TDX7 302 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 C8orf4Q9NR00 106 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 PCDHB16Q9NRJ7 776 aa15.57■□□□□ 0.08
LIME1-201ENST00000309546 PAK1IP1Q9NWT1 392 aaPredicted RBP15.57■□□□□ 0.08
LIME1-201ENST00000309546 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.57■□□□□ 0.08
LIME1-201ENST00000309546 TRBV5-5A0A0J9YX44 114 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 A0A1W2PP11 408 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 A0A1W2PPE3 182 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 TMEM30CPA0ZSE6 113 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 NPIPB11E5RHQ5 1161 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 SNRNP70P08621 437 aaKnown RBP15.56■□□□□ 0.08
LIME1-201ENST00000309546 FAM106CPP0CH98 169 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 PF4V1P10720 104 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 PAX5Q02548 391 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 ST3GAL4Q11206 333 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 MADCAM1Q13477 382 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 HES1Q14469 280 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 Q499Y3 187 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 YIF1BQ5BJH7 314 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 OXLD1Q5BKU9 147 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 NHLRC3Q5JS37 347 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 KHDC1LQ5JSQ8 128 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 DRAM1Q8N682 238 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 GGHQ92820 318 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 OR14A2Q96R54 314 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 MOB4Q9Y3A3 225 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 HSPE1-MOB4S4R3N1 261 aa15.56■□□□□ 0.08
LIME1-201ENST00000309546 TRAV8-7A0A075B6U6 113 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 A0A1W2PPK0 400 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 TCRBV4S1A1TA0A5B7 111 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 ZNF780AO75290 641 aaPredicted RBP15.55■□□□□ 0.08
LIME1-201ENST00000309546 AMY1AP04745 511 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 AMY2AP04746 511 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 IGFBP3P17936 291 aaPredicted RBP15.55■□□□□ 0.08
LIME1-201ENST00000309546 ADARB1P78563 741 aaKnown RBP15.55■□□□□ 0.08
LIME1-201ENST00000309546 CD83Q01151 205 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 DIAPH2-AS1Q14236 149 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 LINC00596Q86U02 117 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 JAGN1Q8N5M9 183 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 OR4X2Q8NGF9 303 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 OR10X1Q8NGY0 326 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 UBALD1Q8TB05 177 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 CCDC107Q8WV48 283 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 MUL1Q969V5 352 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 PGLYRP3Q96LB9 341 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 IFT22Q9H7X7 185 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 LINC00574Q9H8X3 128 aa15.55■□□□□ 0.08
LIME1-201ENST00000309546 A0A1W2PPI3 338 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 EFCAB10A6NFE3 127 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 M0QZK8 103 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 GTF2F2P13984 249 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 TMEM11P17152 192 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 RPS11P62280 158 aaKnown RBP eCLIP15.54■□□□□ 0.08
LIME1-201ENST00000309546 MPV17LQ2QL34 196 aa15.54■□□□□ 0.08
LIME1-201ENST00000309546 KPRPQ5T749 579 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms