RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DHRS7CA6NNS2 312 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 FOXI3A8MTJ6 420 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 FAM25EA8MYX2 175 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 EEF1E1-BLOC1S5C9J1V9 151 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 H0YIZ8 118 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 MFNGO00587 321 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 CCSO14618 274 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 NUPL2O15504 423 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 WDR1O75083 606 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ZFAND5O76080 213 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 JTBO76095 146 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 IGLV3-1P01715 115 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 IGHG1P01857 330 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 S100A8P05109 93 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 CD5P06127 495 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 EGR2P11161 476 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 AKR1C4P17516 323 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 THBS4P35443 961 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SULT1A2P50226 295 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 RAB5CP51148 216 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 RAB13P51153 203 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ZNF133P52736 654 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SUCLG1P53597 346 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 F2RL1P55085 397 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 UCP2P55851 309 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 B2MP61769 119 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 LSM6P62312 80 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 FAM3AP98173 230 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 PLGLB1Q02325 96 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ECH1Q13011 328 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 HIST3H3Q16695 136 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 MST1LQ2TV78 715 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ACSF3Q4G176 576 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 AVPI1Q5T686 147 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR10K2Q6IF99 312 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SLC25A47Q6Q0C1 308 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OPN5Q6U736 354 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 GLIPR1L1Q6UWM5 242 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 BTNL8Q6UX41 500 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 PLXDC2Q6UX71 529 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 CLEC9AQ6UXN8 241 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 KCTD9Q7L273 389 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SLC16A14Q7RTX9 510 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 PRR22Q8IZ63 422 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ZNF101Q8IZC7 436 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR5AS1Q8N127 324 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 GVQW1Q8N7I0 195 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 C15orf54Q8N8G6 183 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 PNLDC1Q8NA58 520 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ZSCAN4Q8NAM6 433 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 POC1AQ8NBT0 407 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ADAD2Q8NCV1 583 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 NOXO1Q8NFA2 376 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR52N4Q8NGI2 321 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR5L2Q8NGL0 311 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR4A4PQ8NGN8 299 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR13C9Q8NGT0 318 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR2AJ1Q8NGZ0 328 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 OR6X1Q8NH79 312 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 LYPD6BQ8NI32 183 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 MARCH1Q8TCQ1 289 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 CASTOR1Q8WTX7 329 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 GLYATL2Q8WU03 294 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 FAM222BQ8WU58 562 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 NUDCD2Q8WVJ2 157 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 PP6455Q8WZ26 134 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 C11orf40Q8WZ69 217 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 RNASE6Q93091 150 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TMEM230Q96A57 120 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 NTNG2Q96CW9 530 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ADAT3Q96EY9 351 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 KLHDC3Q9BQ90 382 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 FAM173AQ9BQD7 235 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 NRIP2Q9BQI9 281 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TM2D1Q9BX74 207 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TMEM59Q9BXS4 323 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SLC5A7Q9GZV3 580 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ARV1Q9H2C2 271 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SMDT1Q9H4I9 107 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 IFT22Q9H7X7 185 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TUBA4BQ9H853 241 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 FN3KRPQ9HA64 309 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 RHOFQ9HBH0 211 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SMCO4Q9NRQ5 59 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 SERINC1Q9NRX5 453 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 CENPMQ9NSP4 180 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 DECR2Q9NUI1 292 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 C1orf123Q9NWV4 160 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 COA4Q9NYJ1 87 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 RCC2Q9P258 522 aaKnown RBP4.18□□□□□ -1.74
CKS1B-201ENST00000308987 ATPIF1Q9UII2 106 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 EDARQ9UNE0 448 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TRRAPQ9Y4A5 3859 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TGP01266 2768 aa4.18□□□□□ -1.74
CKS1B-201ENST00000308987 TRGV5A0A0B4J1U4 118 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 C13orf42A0A1B0GVH6 325 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 A0A1B0GW64 132 aa4.17□□□□□ -1.74
CKS1B-201ENST00000308987 ZNF705EA8MWA4 302 aaPredicted RBP4.17□□□□□ -1.74
CKS1B-201ENST00000308987 INAFM1C9JVW0 142 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms