RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SULT4A1Q9BR01 284 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 FAAP24Q9BTP7 215 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 ATG5Q9H1Y0 275 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 METTL8Q9H825 291 aaKnown RBP18.34■□□□□ 0.53
HOXD4-201ENST00000306324 OR6C3Q9NZP0 311 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 UBE2J1Q9Y385 318 aaPredicted RBP18.34■□□□□ 0.53
HOXD4-201ENST00000306324 METTL21EPA6NDL7 271 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 SRD5A1P18405 259 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 GLP1RP43220 463 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 ERVFRD-1P60508 538 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 C1orf122Q6ZSJ8 110 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 RTN4RL2Q86UN3 420 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 OR5H6Q8NGV6 325 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 LHX4Q969G2 390 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 ABRACLQ9P1F3 81 aa18.33■□□□□ 0.53
HOXD4-201ENST00000306324 ZFHX3Q15911 3703 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 TRAV39A0A0B4J263 110 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 CCDC160A6NGH7 325 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 TMEM127O75204 238 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 IGHV4-38-2P0DP08 117 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 DLX6P56179 175 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 TMEM50BP56557 158 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 SCAND1P57086 179 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 MOGAT2Q3SYC2 334 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 KLF17Q5JT82 389 aaPredicted RBP18.33■□□□□ 0.52
HOXD4-201ENST00000306324 ZNF497Q6ZNH5 498 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 Q6ZTK2 550 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 PDZD9Q8IXQ8 264 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 ZNF565Q8N9K5 539 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 OR13A1Q8NGR1 328 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 CCDC107Q8WV48 283 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 ARHGAP5-AS1Q96IT6 56 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 BCL7BQ9BQE9 202 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 GAL3ST2Q9H3Q3 398 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 ETV7Q9Y603 341 aa18.33■□□□□ 0.52
HOXD4-201ENST00000306324 FOXI3A8MTJ6 420 aaPredicted RBP18.32■□□□□ 0.52
HOXD4-201ENST00000306324 C17orf98A8MV24 154 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 RORCP51449 518 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 SPCS2Q15005 226 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 GPR157Q5UAW9 335 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 ZNF782Q6ZMW2 699 aaPredicted RBP18.32■□□□□ 0.52
HOXD4-201ENST00000306324 C11orf42Q8N5U0 333 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 MRGPRDQ8TDS7 321 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 CORO2AQ92828 525 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 ISOC1Q96CN7 298 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 NCOR1P1Q9H4R4 102 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 RHBDL2Q9NX52 303 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 CEPT1Q9Y6K0 416 aa18.32■□□□□ 0.52
HOXD4-201ENST00000306324 CA11O75493 328 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 FSHBP01225 129 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 MT-ND4P03905 459 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 PRTN3P24158 256 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 OR10R2Q8NGX6 335 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 OR4K15Q8NH41 348 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 RAB3CQ96E17 227 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 PECRQ9BY49 303 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 TAS2R3Q9NYW6 316 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 NUP50Q9UKX7 468 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 TRAPPC2LQ9UL33 140 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 HSF4Q9ULV5 492 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 SPATA2Q9UM82 520 aa18.31■□□□□ 0.52
HOXD4-201ENST00000306324 A0A075B6Q4 140 aa18.3■□□□□ 0.52
HOXD4-201ENST00000306324 RAB27BO00194 218 aa18.3■□□□□ 0.52
HOXD4-201ENST00000306324 KLRD1Q13241 179 aa18.3■□□□□ 0.52
HOXD4-201ENST00000306324 PLAC9Q5JTB6 97 aa18.3■□□□□ 0.52
HOXD4-201ENST00000306324 UNKLQ9H9P5 680 aaKnown RBP18.3■□□□□ 0.52
HOXD4-201ENST00000306324 CENPVL3A0A0U1RRI6 287 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 ZNF729A6NN14 1252 aaPredicted RBP18.29■□□□□ 0.52
HOXD4-201ENST00000306324 H3BMQ9 156 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 CLPXO76031 633 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 IGHV1-8P0DP01 117 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 HOXB4P17483 251 aaPredicted RBP18.29■□□□□ 0.52
HOXD4-201ENST00000306324 OMGP23515 440 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 NCR3LG1Q68D85 454 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 BRD3OSQ6XYD6 125 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 TNFRSF14Q92956 283 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 PHF21AQ96BD5 680 aa18.29■□□□□ 0.52
HOXD4-201ENST00000306324 KCTD12Q96CX2 325 aaKnown RBP18.29■□□□□ 0.52
HOXD4-201ENST00000306324 CHMP1AQ9HD42 196 aaPredicted RBP18.29■□□□□ 0.52
HOXD4-201ENST00000306324 RNASEK-C17orf49H0YIS7 233 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 RBP4P02753 201 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 FAM157CP0CG43 387 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 EPHA1P21709 976 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 CDK2P24941 298 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 PRAMEF5Q5TYX0 476 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 C22orf15Q8WYQ4 148 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 SLC25A38Q96DW6 304 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 ZMAT3Q9HA38 289 aaKnown RBP18.28■□□□□ 0.52
HOXD4-201ENST00000306324 CALYQ9NYX4 217 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 COMMD3Q9UBI1 195 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 AK3Q9UIJ7 227 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 NF1P21359 2839 aa18.28■□□□□ 0.52
HOXD4-201ENST00000306324 KBTBD11-OT1A0A1B0GTJ5 212 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 GNB3P16520 340 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 COX7A1P24310 79 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 SSTR5P35346 364 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 C17orf58Q2M2W7 97 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 RUSC1-AS1Q66K80 236 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 OLFML2AQ68BL7 652 aa18.27■□□□□ 0.52
HOXD4-201ENST00000306324 GAPTQ8N292 157 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms