RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TSPAN15O95858 294 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 OR2H2O95918 312 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 TPT1P13693 172 aaKnown RBP7.95□□□□□ -1.14
PTPRE-202ENST00000306042 LPAR6P43657 344 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 MMDQ15546 238 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 LINC00299Q6ZSB3 139 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 PXT1Q8NFP0 134 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 CLCF1Q9UBD9 225 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 STRAPQ9Y3F4 350 aaKnown RBP7.95□□□□□ -1.14
PTPRE-202ENST00000306042 SPDEFO95238 335 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 ISG15P05161 165 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 WT1P19544 449 aaPredicted RBP7.95□□□□□ -1.14
PTPRE-202ENST00000306042 MMP15P51511 669 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 HLA-DRB3P79483 266 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 PHYHD1Q5SRE7 291 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 OR10P1Q8NGE3 313 aa7.95□□□□□ -1.14
PTPRE-202ENST00000306042 CRYM-AS1A6NIL9 109 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 RPL36A-HNRNPH2H7BZ11 118 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 K7N7A8 449 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 KLF4O43474 513 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 DFFBO76075 338 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 DTYMKP23919 212 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 TAS2R30P59541 319 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 PSG7Q13046 419 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 KCNMB1Q16558 191 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 Q56UQ5 140 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 ANXA10Q9UJ72 324 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 RPH3ALQ9UNE2 315 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 PKDREJQ9NTG1 2253 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 CRYBA2P53672 197 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 GAS1P54826 345 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 LCN2P80188 198 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 GCSAMQ8N6F7 178 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 SOX7Q9BT81 388 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 ARID1AO14497 2285 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 CCSO14618 274 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 SEMA7AO75326 666 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 LALBAP00709 142 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 FAM106CPP0CH98 169 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 ZNF266Q14584 549 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 C12orf54Q6X4T0 127 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 THNSL2Q86YJ6 484 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 FLYWCH2Q96CP2 140 aaKnown RBP7.94□□□□□ -1.14
PTPRE-202ENST00000306042 MRPL13Q9BYD1 178 aaKnown RBP7.94□□□□□ -1.14
PTPRE-202ENST00000306042 TAS2R3Q9NYW6 316 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 UBQLN2Q9UHD9 624 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 IGHV1-18A0A0C4DH31 117 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 GAPDHP04406 335 aaKnown RBP7.94□□□□□ -1.14
PTPRE-202ENST00000306042 THBDP07204 575 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 OR5G3P0C626 314 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 SULT1A3P0DMM9 295 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 SULT1A4P0DMN0 295 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 IAPPP10997 89 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 REG1BP48304 166 aa7.94□□□□□ -1.14
PTPRE-202ENST00000306042 SEBOXQ9HB31 216 aaPredicted RBP7.94□□□□□ -1.14
PTPRE-202ENST00000306042 A0A1W2PN81 502 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 A0A1W2PPE3 182 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 LOC390937A0A1W2PQ73 354 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 CHRNA7P36544 502 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 TMEM33P57088 247 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 OR5T1Q8NG75 326 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 OR13C8Q8NGS7 320 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 SSBP3Q9BWW4 388 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-202ENST00000306042 MRPL37Q9BZE1 423 aaKnown RBP7.93□□□□□ -1.14
PTPRE-202ENST00000306042 COA4Q9NYJ1 87 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 LANCL1O43813 399 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 FBXO24O75426 580 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 TPPPO94811 219 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 FGF2P09038 288 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 SLC25A16P16260 332 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 FSTP19883 344 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 CEBPDP49716 269 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-202ENST00000306042 CTF1Q16619 201 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 TMEM128Q5BJH2 165 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 ZNF561Q8N587 486 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 LRRC75AQ8NAA5 344 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 CMTM2Q8TAZ6 248 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 OR5P3Q8WZ94 311 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 ODAMA1E959 279 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 SSSCA1O60232 199 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 PRB1P04280 392 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 CD1AP06126 327 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 HTR1DP28221 377 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 OR4A4PQ8NGN8 299 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 NANPQ8TBE9 248 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 C1QTNF5Q9BXJ0 243 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 PPIL3Q9H2H8 161 aaKnown RBP7.93□□□□□ -1.14
PTPRE-202ENST00000306042 C7orf69Q9H7B7 122 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 UNKLQ9H9P5 680 aaKnown RBP7.93□□□□□ -1.14
PTPRE-202ENST00000306042 DKK4Q9UBT3 224 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 MTFP1Q9UDX5 166 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 IGHV3OR16-10A0A075B7F0 116 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 SSX5O60225 188 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 CST4P01036 141 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 PPP1CCP36873 323 aaKnown RBP7.93□□□□□ -1.14
PTPRE-202ENST00000306042 BTG1P62324 171 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 ZNF787Q6DD87 383 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 ZIC4Q8N9L1 334 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 OR10Z1Q8NGY1 313 aa7.93□□□□□ -1.14
PTPRE-202ENST00000306042 MISP3Q96FF7 219 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms