RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 KCNAB3O43448 404 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 HLA-DQA1P01909 254 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 GABRA6Q16445 453 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 RTN4RL1Q86UN2 441 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 LYG1Q8N1E2 194 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 TM4SF19Q96DZ7 209 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 MIXL1Q9H2W2 232 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 TRAV34A0A0B4J273 112 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 TRAV17A0A0B4J275 112 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 CDC42EP2O14613 210 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ACAA1P09110 424 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 RAC3P60763 192 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 INSL4Q14641 139 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 KHDC1LQ5JSQ8 128 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 DHRS13Q6UX07 377 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF576Q9H609 170 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 PMELP40967 661 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 PGFP49763 221 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 DUSP2Q05923 314 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 SSPNQ14714 243 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 CD226Q15762 336 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 CLEC12BQ2HXU8 276 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 SPATA46Q5T0L3 261 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 HOGA1Q86XE5 327 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF547Q8IVP9 402 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 FUT9Q9Y231 359 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 WASHC3Q9Y3C0 194 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 HSPB1P04792 205 aaKnown RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 FABP2P12104 132 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 EWSR1Q01844 656 aaKnown RBP eCLIP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM251Q8N6I4 163 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 MRPL37Q9BZE1 423 aaKnown RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 NAGKQ9UJ70 344 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 LIPT2A6NK58 231 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 CA6P23280 308 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF79Q15937 498 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 OR5R1Q8NH85 324 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 GABRG3Q99928 467 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 SLC26A1Q9H2B4 701 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 UFC1Q9Y3C8 167 aa6.74□□□□□ -1.33
SF3B3-201ENST00000302516 H0Y980 276 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM50BP56557 158 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 SKP2Q13309 424 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 VSTM2LQ96N03 204 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 PMCHL2Q9BQD1 86 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 TRAV38-1A0A0B4J264 116 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 A0A0U1RQV5 110 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 OR4C45A6NMZ5 311 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 MKRN2OSH3BPM6 223 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 FFAR1O14842 300 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 THSD4Q6ZMP0 1018 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 RNF122Q9H9V4 155 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 RALYQ9UKM9 306 aaKnown RBP6.73□□□□□ -1.33
SF3B3-201ENST00000302516 VSIG4Q9Y279 399 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF253O75346 499 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 ADAP1O75689 374 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 ZNF32P17041 273 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 C16orf82Q7Z2V1 217 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 TP53RKQ96S44 253 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 UQCR10Q9UDW1 63 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 CACNA1DQ01668 2161 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 TEPPQ6URK8 271 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 MYOZ3Q8TDC0 251 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 PATE1Q8WXA2 126 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 SNRNP40Q96DI7 357 aaKnown RBP6.73□□□□□ -1.33
SF3B3-201ENST00000302516 POM121Q96HA1 1249 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 RASL11BQ9BPW5 248 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 OR51M1Q9H341 326 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 TCRBV16S1A1N1A0A5B0 115 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 IGF2P01344 180 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 HLA-DQB1P01920 261 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 RBPMS2Q6ZRY4 209 aaKnown RBP6.73□□□□□ -1.33
SF3B3-201ENST00000302516 GBGT1Q8N5D6 347 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 DTD1Q8TEA8 209 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 RNF133Q8WVZ7 376 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 SLC52A3Q9NQ40 469 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 PRSS1P07477 247 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 LYZP61626 148 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 WDFY1Q8IWB7 410 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 OR10D3Q8NH80 312 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 OR2V2Q96R30 315 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 GPX7Q96SL4 187 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-201ENST00000302516 WDR13Q9H1Z4 485 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 SCN5AQ14524 2016 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 K7EQS6 105 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 TNFSF14O43557 240 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 COL8A1P27658 744 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 PLPPR5Q32ZL2 321 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 MESTQ5EB52 335 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 CCL4L1Q8NHW4 92 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 NPTNQ9Y639 398 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 MPTX1A8MV57 137 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 CHST1O43916 411 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 NCMAPQ5T1S8 102 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 C5orf17Q8NAS9 161 aa6.73□□□□□ -1.33
SF3B3-201ENST00000302516 RHBDL1O75783 438 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 ARG1P05089 322 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms