RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ERVFRD-1P60508 538 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 ZNF273Q14593 569 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 C17orf58Q2M2W7 97 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 LRRC10Q5BKY1 277 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 KRBOX4Q5JUW0 171 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 TMEM69Q5SWH9 247 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 UTF1Q5T230 341 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 SPNS3Q6ZMD2 512 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 OR13A1Q8NGR1 328 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 GPX8Q8TED1 209 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 NUDCD2Q8WVJ2 157 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 ING3Q9NXR8 418 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 ETAA1Q9NY74 926 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 CLN8Q9UBY8 286 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 ADAM30Q9UKF2 790 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 ANAPC10Q9UM13 185 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 PCDHB10Q9UN67 800 aa7.82□□□□□ -1.16
RFX3-201ENST00000302303 ODAMA1E959 279 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 C15orf65H3BRN8 121 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 H7C1Q1 480 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 CTDSPLO15194 276 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 LANCL1O43813 399 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 MMP23AO75900 390 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 NDUFB7P17568 137 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 GNB2P62879 340 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 LCN2P80188 198 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 LSAMPQ13449 338 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 RBM39Q14498 530 aaKnown RBP7.81□□□□□ -1.16
RFX3-201ENST00000302303 EDDM3AQ14507 147 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 PNLIPRP3Q17RR3 467 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 TMEM249Q2WGJ8 235 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 C11orf91Q3C1V1 193 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 ESCO2Q56NI9 601 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 GDPD3Q7L5L3 318 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 NLRC3Q7RTR2 1065 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 GVQW1Q8N7I0 195 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 Q8N7P7 452 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 OR4K15Q8NH41 348 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 MSI2Q96DH6 328 aaKnown RBP7.81□□□□□ -1.16
RFX3-201ENST00000302303 OCSTAMPQ9BR26 566 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 LINC00574Q9H8X3 128 aa7.81□□□□□ -1.16
RFX3-201ENST00000302303 ZNF230Q9UIE0 474 aaPredicted RBP7.81□□□□□ -1.16
RFX3-201ENST00000302303 MRPS7Q9Y2R9 242 aaKnown RBP7.81□□□□□ -1.16
RFX3-201ENST00000302303 DOCK11Q5JSL3 2073 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 LOC105371242A0A075B767 164 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 KIR2DS1A0A191URI9 304 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 FABP12A6NFH5 140 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 NPIPB11E5RHQ5 1161 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 H3BUI4 141 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 FCGR3AP08637 254 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 CCL3L1P16619 93 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 GDNFP39905 211 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 EDDM3BP56851 147 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 RPL31P62899 125 aaKnown RBP7.8□□□□□ -1.16
RFX3-201ENST00000302303 DGCR2P98153 550 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 MEF2CQ06413 473 aaPredicted RBP7.8□□□□□ -1.16
RFX3-201ENST00000302303 FAM53AQ6NSI3 398 aaPredicted RBP7.8□□□□□ -1.16
RFX3-201ENST00000302303 SNX29P2Q8IUI4 249 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 LYSMD2Q8IV50 215 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 OR52I2Q8NH67 350 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 PPP1R35Q8TAP8 253 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 CCDC107Q8WV48 283 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 SNAPC3Q92966 411 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 RAB39BQ96DA2 213 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 COX4I2Q96KJ9 171 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 CMSS1Q9BQ75 279 aaKnown RBP7.8□□□□□ -1.16
RFX3-201ENST00000302303 SRRQ9GZT4 340 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 Q9N2K0 584 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 KLK11Q9UBX7 282 aa7.8□□□□□ -1.16
RFX3-201ENST00000302303 RBMX2Q9Y388 322 aaKnown RBP7.8□□□□□ -1.16
RFX3-201ENST00000302303 FLNAP21333 2647 aaKnown RBP7.79□□□□□ -1.16
RFX3-201ENST00000302303 MEIKINA0A087WXM9 373 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 TRBV23-1A0A0A0MS06 115 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 PPIAL4CA0A0B4J2A2 164 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 IGKV1-6A0A0C4DH72 117 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 TMEM30CPA0ZSE6 113 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 MEIS3P1A6NDR6 274 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 POM121CA8CG34 1229 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 C17orf98A8MV24 154 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 C12orf77C9JDV5 145 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 ECDO95905 644 aaPredicted RBP7.79□□□□□ -1.16
RFX3-201ENST00000302303 AVPP01185 164 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 MMP9P14780 707 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 NAT1P18440 290 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 S100A5P33763 92 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 DLX1P56177 255 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 PAX8Q06710 450 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 HERPUD1Q15011 391 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 ARL6IP1Q15041 203 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 HMGN3Q15651 99 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 SRSF7Q16629 238 aaKnown RBP eCLIP7.79□□□□□ -1.16
RFX3-201ENST00000302303 PYHIN1Q6K0P9 492 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 BAIAP2L2Q6UXY1 529 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 Q6ZS49 121 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
RFX3-201ENST00000302303 MRGPRDQ8TDS7 321 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 NEK7Q8TDX7 302 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 MAFIPQ8WZ33 124 aa7.79□□□□□ -1.16
RFX3-201ENST00000302303 H1FXQ92522 213 aaKnown RBP7.79□□□□□ -1.16
RFX3-201ENST00000302303 LPAR2Q9HBW0 351 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms