RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 PTPMT1Q8WUK0 201 aaPredicted RBP12.5□□□□□ -0.41
CDT1-201ENST00000301019 MIEN1Q9BRT3 115 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
CDT1-201ENST00000301019 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 ZNF318Q5VUA4 2279 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 PFN1P07737 140 aaKnown RBP12.5□□□□□ -0.41
CDT1-201ENST00000301019 UMODP07911 640 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 ADH5P11766 374 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 ARF1P84077 181 aaKnown RBP12.5□□□□□ -0.41
CDT1-201ENST00000301019 VAMP3Q15836 100 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 HNRNPA1L2Q32P51 320 aaKnown RBP12.5□□□□□ -0.41
CDT1-201ENST00000301019 OR8B12Q8NGG6 310 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 ZCCHC14Q8WYQ9 949 aaKnown RBP12.5□□□□□ -0.41
CDT1-201ENST00000301019 OBSL1O75147 1896 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 GAGE1Q13065 139 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 ABLIM2Q6H8Q1 611 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 WFDC8Q8IUA0 241 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 OR51I2Q9H344 312 aa12.5□□□□□ -0.41
CDT1-201ENST00000301019 FRMD6-AS1P0C7T7 363 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 THBS3P49746 956 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDT1-201ENST00000301019 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 FDX2Q6P4F2 183 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 DTX1Q86Y01 620 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 HLA-CQ95604 372 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 CTHRC1Q96CG8 243 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 ZNF286AQ9HBT8 521 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 HRASLS2Q9NWW9 162 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
CDT1-201ENST00000301019 NOTCH4Q99466 2003 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 DCHS1Q96JQ0 3298 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 KIR2DL5BA0A0G2JN68 375 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 KIR2DL5BA0A0G2JPC4 375 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 COL8A2P25067 703 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 BLKP51451 505 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 ZNF141Q15928 474 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 LIAT1Q6ZQX7 453 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 KIR2DL5AQ8N109 375 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 C12orf76Q8N812 135 aaPredicted RBP12.49□□□□□ -0.41
CDT1-201ENST00000301019 APH1AQ96BI3 265 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 PGAM5Q96HS1 289 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 EPOPA6NHQ4 379 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 M0QZK8 103 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 GGCTO75223 188 aaKnown RBP12.49□□□□□ -0.41
CDT1-201ENST00000301019 ZNF737O75373 536 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 CBLN1P23435 193 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 RND2P52198 227 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 BIDP55957 195 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 SLC35B1P78383 322 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 IL13RA2Q14627 380 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 ZNF726P1Q15940 193 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 FFAR4Q5NUL3 377 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 LHX4Q969G2 390 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 ANXA10Q9UJ72 324 aa12.49□□□□□ -0.41
CDT1-201ENST00000301019 TRANK1O15050 2925 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 GDF9O60383 454 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 OTX2P32243 289 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 RPL23P62829 140 aaKnown RBP12.48□□□□□ -0.41
CDT1-201ENST00000301019 RAB30Q15771 203 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 ST6GALNAC6Q969X2 333 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 PTX4Q96A99 478 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 MMABQ96EY8 250 aaPredicted RBP12.48□□□□□ -0.41
CDT1-201ENST00000301019 ASXL3Q9C0F0 2248 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 KIAA1549Q9HCM3 1950 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 CDS2O95674 445 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
CDT1-201ENST00000301019 SLC35E2P0CK97 266 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 PMCHP20382 165 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 BAGE3Q86Y29 109 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 TMEM170AQ8WVE7 144 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 RASL10BQ96S79 203 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 Q9N2K0 584 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 RNF115Q9Y4L5 304 aa12.48□□□□□ -0.41
CDT1-201ENST00000301019 A0A1W2PQU0 124 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 PIGYQ3MUY2 71 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 OR8G2PQ6IF36 304 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 ADAMTSL4Q6UY14 1074 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 SLC38A9Q8NBW4 561 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 OR51H1Q8NH63 302 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 RBMXL1Q96E39 390 aaKnown RBP12.47□□□□□ -0.41
CDT1-201ENST00000301019 TBL1XR1Q9BZK7 514 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 S1PR5Q9H228 398 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 TXNIPQ9H3M7 391 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
CDT1-201ENST00000301019 DEC1Q9P2X7 70 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 FOXS1O43638 330 aa12.47□□□□□ -0.41
CDT1-201ENST00000301019 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
CDT1-201ENST00000301019 DLX2Q07687 328 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms