RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 UBALD1Q8TB05 177 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 NOL4LQ96MY1 436 aaPredicted RBP9.87□□□□□ -0.83
TRUB1-201ENST00000298746 UCN2Q96RP3 112 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 DUX1O43812 170 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 VDAC1P21796 283 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 FASLGP48023 281 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 RAB4BP61018 213 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 MRPS21P82921 87 aaKnown RBP9.87□□□□□ -0.83
TRUB1-201ENST00000298746 PAX5Q02548 391 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 P2RY6Q15077 328 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 PLPPR5Q32ZL2 321 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 LBHQ53QV2 105 aaPredicted RBP9.87□□□□□ -0.83
TRUB1-201ENST00000298746 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 ANGPTL4Q9BY76 406 aa9.87□□□□□ -0.83
TRUB1-201ENST00000298746 PNRC2Q9NPJ4 139 aaKnown RBP9.87□□□□□ -0.83
TRUB1-201ENST00000298746 CHD3Q12873 2000 aaKnown RBP9.87□□□□□ -0.83
TRUB1-201ENST00000298746 A0A1B0GU03 582 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 A0A1B0GW64 132 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 M0R143 59 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 DVL1O14640 695 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 B4GALT1P15291 398 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 CHRNA7P36544 502 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 VEGFBP49765 207 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 SUMO3P55854 103 aaPredicted RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 PMP22Q01453 160 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 IQCJQ1A5X6 159 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 Q6ZS52 159 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 OR1K1Q8NGR3 316 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 OR51I2Q9H344 312 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 Q9N2K0 584 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 A0A0U1RQV5 110 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 A8MWP6 167 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 IGHV3-9P01782 118 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 CCL1P22362 96 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 CD38P28907 300 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 MAS1LP35410 378 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 IL24Q13007 206 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 TMEM41BQ5BJD5 291 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 MYPOPQ86VE0 399 aaPredicted RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 SELENOHQ8IZQ5 122 aaKnown RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 RAB24Q969Q5 203 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 ALKBH3Q96Q83 286 aaPredicted RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 RBKSQ9H477 322 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 VSIRQ9H7M9 311 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 SLC25A22Q9H936 323 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 THADAQ6YHU6 1953 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 A0A1W2PPC4 97 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 NPIPB13A6NJU9 1138 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 NPIPB4C9JG80 1138 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 ZFAND5O76080 213 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 SCTP09683 121 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 BAXQ07812 192 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 C9orf135Q5VTT2 229 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF818PQ6ZRF7 136 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 LHFPL2Q6ZUX7 228 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 H1FOOQ8IZA3 346 aaPredicted RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 MAML2Q8IZL2 1156 aaPredicted RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 PATZ1Q9HBE1 687 aaKnown RBP9.86□□□□□ -0.83
TRUB1-201ENST00000298746 PSENENQ9NZ42 101 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 TP53TG5Q9Y2B4 290 aa9.86□□□□□ -0.83
TRUB1-201ENST00000298746 SZT2Q5T011 3432 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 UBE2L5PA0A1B0GUS4 154 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 LILRA5A6NI73 299 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 CA11O75493 328 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 TMEM50AO95807 157 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 PDGFBP01127 241 aaPredicted RBP9.85□□□□□ -0.83
TRUB1-201ENST00000298746 MSX1P28360 303 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 PSMB3P49720 205 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 HBG1P69891 147 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 HBG2P69892 147 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF611Q8N823 705 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 OR5R1Q8NH85 324 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 RDH5Q92781 318 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF837Q96EG3 531 aaPredicted RBP9.85□□□□□ -0.83
TRUB1-201ENST00000298746 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 SDF2L1Q9HCN8 221 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 VAX2Q9UIW0 290 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 A0A1W2PNV4 684 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF732B4DXR9 585 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 HS3ST1O14792 307 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 CLDN1O95832 211 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 CST2P09228 141 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.85□□□□□ -0.83
TRUB1-201ENST00000298746 DTX1Q86Y01 620 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 LRTM2Q8N967 370 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 TSTD1Q8NFU3 115 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 IL22RA2Q969J5 263 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 PLA2G3Q9NZ20 509 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 CACNG5Q9UF02 275 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF320A2RRD8 509 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 NPBWR2P48146 333 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 NUTF2P61970 127 aaKnown RBP9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF845Q96IR2 970 aaPredicted RBP9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ELOVL1Q9BW60 279 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 NAT8Q9UHE5 227 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 PPP1R3CQ9UQK1 317 aa9.85□□□□□ -0.83
TRUB1-201ENST00000298746 ZNF816-ZNF321PA0A0X1KG74 233 aa9.84□□□□□ -0.83
TRUB1-201ENST00000298746 FAM3BP58499 235 aaPredicted RBP9.84□□□□□ -0.83
TRUB1-201ENST00000298746 HNRNPKP61978 463 aaKnown RBP eCLIP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms