RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 RALYQ9UKM9 306 aaKnown RBP7.96□□□□□ -1.13
PRDM9-201ENST00000296682 RCL1Q9Y2P8 373 aaKnown RBP7.96□□□□□ -1.13
PRDM9-201ENST00000296682 DMXL2Q8TDJ6 3036 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 ADAM20O43506 726 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 SPRY3O43610 288 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 IAPPP10997 89 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 SPINK9Q5DT21 86 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 ATRAIDQ6UW56 229 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 SNIP1Q8TAD8 396 aaKnown RBP7.96□□□□□ -1.14
PRDM9-201ENST00000296682 CD300LFQ8TDQ1 290 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 MARC2Q969Z3 335 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 C10orf35Q96D05 121 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 BSCL2Q96G97 398 aaPredicted RBP7.96□□□□□ -1.14
PRDM9-201ENST00000296682 C1QTNF5Q9BXJ0 243 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 LHX6Q9UPM6 363 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 WNK2Q9Y3S1 2297 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 TNRC6AQ8NDV7 1962 aaKnown RBP7.96□□□□□ -1.14
PRDM9-201ENST00000296682 C3orf85A0A1B0GTC6 90 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 CDK2AP1O14519 115 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 TOR1AO14656 332 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 ST8SIA3O43173 380 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 B3GALNT1O75752 331 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 IGHV1-2P23083 117 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 AESQ08117 197 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 CXorf66Q5JRM2 361 aaPredicted RBP7.96□□□□□ -1.14
PRDM9-201ENST00000296682 PRSS54Q6PEW0 395 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 STOML3Q8TAV4 291 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 FAM213BQ8TBF2 198 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 RNF141Q8WVD5 230 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 RBMXL1Q96E39 390 aaKnown RBP7.96□□□□□ -1.14
PRDM9-201ENST00000296682 SLC25A32Q9H2D1 315 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 EDARQ9UNE0 448 aa7.96□□□□□ -1.14
PRDM9-201ENST00000296682 ATMQ13315 3056 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 M0R036 132 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 GPR31O00270 319 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 CTSDP07339 412 aaPredicted RBP7.95□□□□□ -1.14
PRDM9-201ENST00000296682 NKX2-1P43699 371 aaPredicted RBP7.95□□□□□ -1.14
PRDM9-201ENST00000296682 FAM214BQ7L5A3 538 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 C9orf106Q8NAJ2 232 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 ADAMTS17Q8TE56 1095 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 NINJ1Q92982 152 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 SARAFQ96BY9 339 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 PIK3IP1Q96FE7 263 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 RTL8AQ9BWD3 113 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 TM2D1Q9BX74 207 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 REG4Q9BYZ8 158 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 DECR2Q9NUI1 292 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 OR1A1Q9P1Q5 309 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 PTPRQQ9UMZ3 2332 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 IGKV1D-13A0A0B4J2D9 117 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 TSPAN15O95858 294 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 IGKV1-13P0DP09 117 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 LYL1P12980 280 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
PRDM9-201ENST00000296682 Q6ZRG5 221 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 SSX9Q7RTT3 188 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 RPRMLQ8N4K4 120 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 MRGPRDQ8TDS7 321 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 ARL11Q969Q4 196 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 ERGIC1Q969X5 290 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 CNTNAP3BQ96NU0 1288 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 CNTNAP3Q9BZ76 1288 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 PRDM14Q9GZV8 571 aa7.95□□□□□ -1.14
PRDM9-201ENST00000296682 MPPED1O15442 326 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 KRASP01116 189 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 MBPP02686 304 aaPredicted RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 PVALBP20472 110 aaPredicted RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 MPV17P39210 176 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 CEACAM6P40199 344 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 OR8B8Q15620 311 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 EIF5AL1Q6IS14 154 aaKnown RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 C20orf204Q6ZNR8 217 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 ZNF818PQ6ZRF7 136 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 BVESQ8NE79 360 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 AKAP13Q12802 2813 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 IGHV3OR15-7A0A075B7D8 119 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 SLC25A4P12235 298 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 UCP2P55851 309 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 SRSF3P84103 164 aaKnown RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 FAM201AQ5SY85 155 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 SHEQ5VZ18 495 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 BTNL3Q6UXE8 466 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 ASCL4Q6XD76 172 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 MDS2Q8NDY4 140 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 OR5A2Q8NGI9 324 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 POM121Q96HA1 1249 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 FGF23Q9GZV9 251 aaPredicted RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 TMEM100Q9NV29 134 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 RASL12Q9NYN1 266 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 KCNIP1Q9NZI2 227 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 NUP50Q9UKX7 468 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 FBXO7Q9Y3I1 522 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 TRBV6-7A0A0A0MS04 114 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 BORCS7-ASMTA0A0B4J1R7 106 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 RPL36A-HNRNPH2H7BZ11 118 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 TERTO14746 1132 aaKnown RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 OR3A1P47881 315 aa7.94□□□□□ -1.14
PRDM9-201ENST00000296682 ZNF816Q0VGE8 651 aaPredicted RBP7.94□□□□□ -1.14
PRDM9-201ENST00000296682 PSG7Q13046 419 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms