RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 M0R1B8 84 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 B3GALNT1O75752 331 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 OR2H2O95918 312 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 CTSDP07339 412 aaPredicted RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 FHITP49789 147 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 AESQ08117 197 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 PLEKHN1Q494U1 663 aaPredicted RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 C22orf34Q6ZV56 151 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF573Q86YE8 665 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 HSD17B11Q8NBQ5 300 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 POC1AQ8NBT0 407 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 OR8U1Q8NH10 309 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 SNIP1Q8TAD8 396 aaKnown RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 SYT3Q9BQG1 590 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 FAM96BQ9Y3D0 163 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 MRPL49Q13405 166 aaKnown RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 PPA1Q15181 289 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 ATRAIDQ6UW56 229 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 Q6ZT83 130 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 LDLRAD3Q86YD5 345 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF808Q8N4W9 903 aaPredicted RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
RUBCN-202ENST00000296343 PLPPR1Q8TBJ4 325 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 SARAFQ96BY9 339 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 PIK3IP1Q96FE7 263 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 REG4Q9BYZ8 158 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 NMES1Q9C002 83 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 DKK4Q9UBT3 224 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 EDARQ9UNE0 448 aa11.22□□□□□ -0.61
RUBCN-202ENST00000296343 EIF3GO75821 320 aaKnown RBP eCLIP11.21□□□□□ -0.61
RUBCN-202ENST00000296343 SNAPC5O75971 98 aa11.21□□□□□ -0.61
RUBCN-202ENST00000296343 DTYMKP23919 212 aa11.21□□□□□ -0.61
RUBCN-202ENST00000296343 RPL12P30050 165 aaKnown RBP11.21□□□□□ -0.61
RUBCN-202ENST00000296343 RPS16P62249 146 aaKnown RBP11.21□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF169Q14929 603 aaPredicted RBP11.21□□□□□ -0.61
RUBCN-202ENST00000296343 ZNF695Q8IW36 515 aa11.21□□□□□ -0.61
RUBCN-202ENST00000296343 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.61
RUBCN-202ENST00000296343 CISD2Q8N5K1 135 aaKnown RBP11.21□□□□□ -0.61
RUBCN-202ENST00000296343 OR2Z1Q8NG97 314 aa11.21□□□□□ -0.61
RUBCN-202ENST00000296343 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
RUBCN-202ENST00000296343 LHX6Q9UPM6 363 aa11.21□□□□□ -0.61
RUBCN-202ENST00000296343 CHD3Q12873 2000 aaKnown RBP11.21□□□□□ -0.62
RUBCN-202ENST00000296343 C3orf85A0A1B0GTC6 90 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 PSPNO60542 156 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 CST4P01036 141 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 TMEM33P57088 247 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 CYCSP99999 105 aaKnown RBP11.21□□□□□ -0.62
RUBCN-202ENST00000296343 FAM27E3Q08E93 113 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 SMCO1Q147U7 214 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 NRN1LQ496H8 165 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.62
RUBCN-202ENST00000296343 SPRNQ5BIV9 151 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.62
RUBCN-202ENST00000296343 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 DHRS11Q6UWP2 260 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 SEM1Q6ZVN7 128 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 BAP18Q8IXM2 172 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.62
RUBCN-202ENST00000296343 OR51I2Q9H344 312 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 Q9N2K0 584 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 PCDHB16Q9NRJ7 776 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 RASL12Q9NYN1 266 aa11.21□□□□□ -0.62
RUBCN-202ENST00000296343 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.62
RUBCN-202ENST00000296343 IGHV3OR15-7A0A075B7D8 119 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 ATXN7O15265 892 aaPredicted RBP11.2□□□□□ -0.62
RUBCN-202ENST00000296343 MLNRO43193 412 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 TUSC2O75896 110 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 CST7O76096 145 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 SLC25A4P12235 298 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 UBA52P62987 128 aaKnown RBP11.2□□□□□ -0.62
RUBCN-202ENST00000296343 TMEM187Q14656 261 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 PRSS54Q6PEW0 395 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 FBXL17Q9UF56 701 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 LOC105371267A0A1B0GV96 52 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 MPPED1O15442 326 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 ADAM20O43506 726 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 SSSCA1O60232 199 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 GABRA2P47869 451 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 DPPA2Q7Z7J5 298 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 FAM234AQ9H0X4 552 aa11.2□□□□□ -0.62
RUBCN-202ENST00000296343 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
RUBCN-202ENST00000296343 RTL6Q6ICC9 239 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 CCDC54Q8NEL0 328 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 DEFB108BQ8NET1 73 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 OR10V1Q8NGI7 309 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 S100PBPQ96BU1 408 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 MOB3AQ96BX8 217 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 STARD4Q96DR4 205 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 ABHD17AQ96GS6 310 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 CNTNAP3BQ96NU0 1288 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 RTL8AQ9BWD3 113 aa11.19□□□□□ -0.62
RUBCN-202ENST00000296343 CNTNAP3Q9BZ76 1288 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms