RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 THOC3Q96J01 351 aaKnown RBP16.76■□□□□ 0.27
NKX6-1-201ENST00000295886 SIGLEC12Q96PQ1 595 aa16.76■□□□□ 0.27
NKX6-1-201ENST00000295886 Q9N2K0 584 aa16.76■□□□□ 0.27
NKX6-1-201ENST00000295886 PUS1Q9Y606 427 aaKnown RBP eCLIP16.76■□□□□ 0.27
NKX6-1-201ENST00000295886 SLC22A20A6NK97 555 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 K7N7A8 449 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 HMGN3Q15651 99 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 IZUMO4Q1ZYL8 232 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 DCAF12Q5T6F0 453 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 C20orf204Q6ZNR8 217 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 MRPL21Q7Z2W9 205 aaKnown RBP16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 OR5C1Q8NGR4 320 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 PRDM14Q9GZV8 571 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 KCNJ16Q9NPI9 418 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 GPR179Q6PRD1 2367 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 TNRC6BQ9UPQ9 1833 aaKnown RBP16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 PROB1E7EW31 1015 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 HS3ST1O14792 307 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 IGHV2-5P01817 119 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 RD3LP0DJH9 198 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 EPHA1P21709 976 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 DUSP3P51452 185 aaPredicted RBP16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 UCP2P55851 309 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 REPIN1Q9BWE0 567 aaKnown RBP16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 C11orf1Q9H5F2 150 aa16.75■□□□□ 0.27
NKX6-1-201ENST00000295886 EIF2S3P41091 472 aaKnown RBP16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 COLCA1Q6ZS62 124 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 C17orf78Q8N4C9 275 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 TMEM252Q8N6L7 170 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 H3BP45 60 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 YKT6O15498 198 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 ZXDAP98168 799 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 VASH2Q86V25 355 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 ODF3L1Q8IXM7 274 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 RDH5Q92781 318 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 SLC35B3Q9H1N7 401 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 LOXL2Q9Y4K0 774 aa16.74■□□□□ 0.27
NKX6-1-201ENST00000295886 TRAV39A0A0B4J263 110 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 ATXN7O15265 892 aaPredicted RBP16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 NDUFS6O75380 124 aaKnown RBP16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 CDS2O95674 445 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 NAPSAO96009 420 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 SULT1A1P50225 295 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 DYNLT3P51808 116 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 TAAR9Q96RI9 348 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 FBP1P09467 338 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 FGF12P61328 243 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 VAMP2P63027 116 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 HAGHQ16775 308 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 ZDHHC23Q8IYP9 409 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 FAM86C1Q9NVL1 165 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 PLA2G3Q9NZ20 509 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 STRAPQ9Y3F4 350 aaKnown RBP16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 NCOR1O75376 2440 aa16.73■□□□□ 0.27
NKX6-1-201ENST00000295886 AP4M1O00189 453 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 LMO1P25800 156 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 ZNF154Q13106 437 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 NCMAPQ5T1S8 102 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 WDR5BQ86VZ2 330 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 COMMD1Q8N668 190 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 UBALD1Q8TB05 177 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 TMEM56Q96MV1 263 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 TUBA4BQ9H853 241 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 PLSCR2Q9NRY7 297 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 TMEM56-RWDD3S4R434 201 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 LOC400499M0QZD8 3231 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 TRAPPC2LH3BP13 241 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 SERPINA7P05543 415 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 MAGEA5P43359 124 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 C6orf15Q6UXA7 325 aaPredicted RBP16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 OR51H1Q8NH63 302 aa16.72■□□□□ 0.27
NKX6-1-201ENST00000295886 A0A0G2JRQ6 117 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 ARGFXA6NJG6 315 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 CHST1O43916 411 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 CER1O95813 267 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 LHX2P50458 406 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 RAB5CP51148 216 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 TECTBQ96PL2 329 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 PBDC1Q9BVG4 233 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 PLEKHF2Q9H8W4 249 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 IGHV3-64DA0A0J9YX35 117 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 NEURL1O76050 574 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 PMELP40967 661 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 RAB1AP62820 205 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 CEACAM21Q3KPI0 293 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 OR2M7Q8NG81 312 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 LYRM2Q9NU23 88 aaPredicted RBP16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 NBEAQ8NFP9 2946 aa16.71■□□□□ 0.27
NKX6-1-201ENST00000295886 TDGF1P13385 188 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 ZNF266Q14584 549 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 NMSQ5H8A3 153 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 SPSB3Q6PJ21 355 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 LINC00696Q6ZRV3 163 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 MYPOPQ86VE0 399 aaPredicted RBP16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 PRR18Q8N4B5 295 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 PLPPR1Q8TBJ4 325 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 IL1F10Q8WWZ1 152 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 TMPRSS5Q9H3S3 457 aa16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 BOKQ9UMX3 212 aaPredicted RBP16.7■□□□□ 0.26
NKX6-1-201ENST00000295886 ASPMQ8IZT6 3477 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms