RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 IGFBP7Q16270 282 aa7.75□□□□□ -1.17
PDPN-201ENST00000294489 PAN3Q58A45 887 aaKnown RBP7.75□□□□□ -1.17
PDPN-201ENST00000294489 SPIN3Q5JUX0 258 aa7.75□□□□□ -1.17
PDPN-201ENST00000294489 PRSS54Q6PEW0 395 aa7.75□□□□□ -1.17
PDPN-201ENST00000294489 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
PDPN-201ENST00000294489 MRPL30Q8TCC3 161 aaKnown RBP7.75□□□□□ -1.17
PDPN-201ENST00000294489 TREM2Q9NZC2 230 aa7.75□□□□□ -1.17
PDPN-201ENST00000294489 GLS2Q9UI32 602 aa7.75□□□□□ -1.17
PDPN-201ENST00000294489 H0YL77 283 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 PTBP3O95758 552 aaKnown RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 OR5AC1P0C628 307 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 MZT1Q08AG7 82 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 IAH1Q2TAA2 248 aaPredicted RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 ESCO2Q56NI9 601 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 Q6P435 159 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 KDF1Q8NAX2 398 aaPredicted RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 POC1AQ8NBT0 407 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SPEF1Q9Y4P9 236 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 BOD1L1Q8NFC6 3051 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 OR2H2O95918 312 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 TMEM187Q14656 261 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 ZNF146Q15072 292 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 BEX5Q5H9J7 111 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 RGS7BPQ6MZT1 257 aaPredicted RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 C22orf34Q6ZV56 151 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 OR4A4PQ8NGN8 299 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 ZCCHC14Q8WYQ9 949 aaKnown RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 ZNF471Q9BX82 626 aaPredicted RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 HES4Q9HCC6 221 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 PCDHB10Q9UN67 800 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SHANK1Q9Y566 2161 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 PRRC2CQ9Y520 2896 aaKnown RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 IGHV3-64DA0A0J9YX35 117 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 A6NLC8 198 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 LEUTXA8MZ59 168 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SIRPB1O00241 398 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 MLNRO43193 412 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 CRYAAP02489 173 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 S100A10P60903 97 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 FAM27E3Q08E93 113 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 RAB32Q13637 225 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SMCO1Q147U7 214 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SP6Q3SY56 376 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SHEQ5VZ18 495 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 GGNBP1Q5YKI7 109 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 LIAT1Q6ZQX7 453 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 Q6ZR03 302 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 MOB1BQ7L9L4 216 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 C11orf53Q8IXP5 236 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 LGI3Q8N145 548 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 SECTM1Q8WVN6 248 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
PDPN-201ENST00000294489 ST8SIA2Q92186 375 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 RNF126Q9BV68 326 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 FZR1Q9UM11 496 aa7.74□□□□□ -1.17
PDPN-201ENST00000294489 IGLV3-9A0A075B6K5 115 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 F5H0A9 414 aaPredicted RBP7.73□□□□□ -1.17
PDPN-201ENST00000294489 M0R1B8 84 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
PDPN-201ENST00000294489 IGHV3-13P01766 116 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 RLN2P04090 185 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 SFTPCP11686 197 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 BMP5P22003 454 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 CA7P43166 264 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 ZNF83P51522 516 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 SRPXP78539 464 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 HLA-DRB3P79483 266 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 MSMPQ1L6U9 139 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 ZNF880Q6PDB4 577 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 LRTM2Q8N967 370 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 OR10J5Q8NHC4 309 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 AUP1Q9Y679 476 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 GPR31O00270 319 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 SLC33A1O00400 549 aaPredicted RBP7.73□□□□□ -1.17
PDPN-201ENST00000294489 MPPED1O15442 326 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 LYL1P12980 280 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 S100GP29377 79 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 GNRHRP30968 328 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 GLRXP35754 106 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 LUMP51884 338 aaPredicted RBP7.73□□□□□ -1.17
PDPN-201ENST00000294489 IL15RAQ13261 267 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 FBXL19-AS1Q494R0 122 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 C20orf204Q6ZNR8 217 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 COMMD7Q86VX2 200 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 CMTM1Q8IZ96 169 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 NUP37Q8NFH4 326 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 OR11L1Q8NGX0 322 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
PDPN-201ENST00000294489 KIRREL1Q96J84 757 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 SLC5A7Q9GZV3 580 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 TRAPPC2LQ9UL33 140 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 SVILO95425 2214 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 ACACAQ13085 2346 aa7.73□□□□□ -1.17
PDPN-201ENST00000294489 C3orf85A0A1B0GTC6 90 aa7.72□□□□□ -1.17
PDPN-201ENST00000294489 C3orf80F5H4A9 247 aa7.72□□□□□ -1.17
PDPN-201ENST00000294489 H0YIZ8 118 aa7.72□□□□□ -1.17
PDPN-201ENST00000294489 C16orf97H3BN30 126 aa7.72□□□□□ -1.17
PDPN-201ENST00000294489 TUSC2O75896 110 aa7.72□□□□□ -1.17
PDPN-201ENST00000294489 RCC1P18754 421 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms