RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 OR11L1Q8NGX0 322 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-201ENST00000292808 PKIBQ9C010 78 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 MS4A7Q9GZW8 240 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-201ENST00000292808 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
ABCF3-201ENST00000292808 H0YL77 283 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 OR5AC1P0C628 307 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 HERV-K104P61576 105 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 TMEM187Q14656 261 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 ZNF573Q86YE8 665 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 SPERTQ8NA61 448 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 LHFPL5Q8TAF8 219 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 MRPL24Q96A35 216 aaKnown RBP11.93□□□□□ -0.5
ABCF3-201ENST00000292808 S100PBPQ96BU1 408 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 SUCNR1Q9BXA5 334 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 NAA60Q9H7X0 242 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
ABCF3-201ENST00000292808 IGHV3-64DA0A0J9YX35 117 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 J3QT63 122 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 HS3ST1O14792 307 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 APOC3P02656 99 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 HKR1P10072 659 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 PXDC1Q5TGL8 231 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 Q6ZS49 121 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 FAM169BQ8N8A8 192 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 MOB3AQ96BX8 217 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 ADAT1Q9BUB4 502 aaKnown RBP11.92□□□□□ -0.5
ABCF3-201ENST00000292808 SFXN3Q9BWM7 321 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
ABCF3-201ENST00000292808 SHANK1Q9Y566 2161 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 MLNRO43193 412 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 DEDDO75618 318 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 SCTP09683 121 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 ZNF273Q14593 569 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
ABCF3-201ENST00000292808 MPV17LQ2QL34 196 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 TMED6Q8WW62 240 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 RDH5Q92781 318 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 Q9N2K0 584 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 ASF1BQ9NVP2 202 aa11.92□□□□□ -0.5
ABCF3-201ENST00000292808 PPYP01298 95 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 MSMPQ1L6U9 139 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 C22orf34Q6ZV56 151 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SUMF2Q8NBJ7 301 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SNRNP40Q96DI7 357 aaKnown RBP11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SYT3Q9BQG1 590 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 PURGQ9UJV8 347 aaKnown RBP11.91□□□□□ -0.5
ABCF3-201ENST00000292808 LRP5LA4QPB2 252 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 NAPSAO96009 420 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SELEP16581 610 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 TMPRSS3P57727 454 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 ZNF154Q13106 437 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SMCO1Q147U7 214 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 EIF5AL1Q6IS14 154 aaKnown RBP11.91□□□□□ -0.5
ABCF3-201ENST00000292808 Q6ZR03 302 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 FAM58AQ8N1B3 248 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 SAT2Q96F10 170 aaPredicted RBP11.91□□□□□ -0.5
ABCF3-201ENST00000292808 TINAGQ9UJW2 476 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 FZR1Q9UM11 496 aa11.91□□□□□ -0.5
ABCF3-201ENST00000292808 ARID1AO14497 2285 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 TLN1Q9Y490 2541 aaKnown RBP11.9□□□□□ -0.5
ABCF3-201ENST00000292808 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.5
ABCF3-201ENST00000292808 A0A0G2JNJ9 132 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
ABCF3-201ENST00000292808 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
ABCF3-201ENST00000292808 ERVK11-1P61568 191 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 TIMM23BQ5SRD1 257 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 ATRAIDQ6UW56 229 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 RSRP1Q9BUV0 290 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 Q9UFV3 132 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 ZNF835Q9Y2P0 537 aa11.9□□□□□ -0.5
ABCF3-201ENST00000292808 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 H7C1Q1 480 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 K7EPK0 472 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 KITLGP21583 273 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 CCKARP32238 428 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 ZNF83P51522 516 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 FAM71E2Q8N5Q1 922 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 OR8G5Q8NG78 346 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 C18orf12Q96KH6 178 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 LPAR3Q9UBY5 353 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 A8MXE2 369 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 PHF1O43189 567 aaPredicted RBP11.89□□□□□ -0.51
ABCF3-201ENST00000292808 MST1LQ2TV78 715 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 GFRALQ6UXV0 394 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 MSI2Q96DH6 328 aaKnown RBP11.89□□□□□ -0.51
ABCF3-201ENST00000292808 LRRC46Q96FV0 321 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 SMIM8Q96KF7 97 aa11.89□□□□□ -0.51
ABCF3-201ENST00000292808 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms