RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MRPL24Q96A35 216 aaKnown RBP11.19□□□□□ -0.62
PTCD1-201ENST00000292478 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
PTCD1-201ENST00000292478 Q9N2K0 584 aa11.19□□□□□ -0.62
PTCD1-201ENST00000292478 PIPOXQ9P0Z9 390 aa11.19□□□□□ -0.62
PTCD1-201ENST00000292478 K7ESF4 209 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 STARD6P59095 220 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 SLC25A40Q8TBP6 338 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 ZNF385AQ96PM9 386 aaKnown RBP11.18□□□□□ -0.62
PTCD1-201ENST00000292478 A0A0J9YW62 118 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 LEUTXA8MZ59 168 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 ZXDAP98168 799 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 CLEC12BQ2HXU8 276 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 FHL5Q5TD97 284 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 TMEM65Q6PI78 240 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 SLC25A47Q6Q0C1 308 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 BTNL3Q6UXE8 466 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 CHRNA10Q9GZZ6 450 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 MS4A5Q9H3V2 200 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 SLC31A2O15432 143 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 MMP9P14780 707 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 IGLV3-21P80748 117 aaPredicted RBP11.18□□□□□ -0.62
PTCD1-201ENST00000292478 KCNK17Q96T54 332 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 TINAGQ9UJW2 476 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 EFNB2P52799 333 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTCD1-201ENST00000292478 MRPL22Q9NWU5 206 aaKnown RBP11.18□□□□□ -0.62
PTCD1-201ENST00000292478 MRPS18BQ9Y676 258 aaKnown RBP11.18□□□□□ -0.62
PTCD1-201ENST00000292478 PARP14Q460N5 1801 aa11.18□□□□□ -0.62
PTCD1-201ENST00000292478 PGA4P0DJD7 388 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 NAAAQ02083 359 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 VAX2Q9UIW0 290 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 KLK13Q9UKR3 277 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 BRS3P32247 399 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 PRSS53Q2L4Q9 553 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 CEACAM21Q3KPI0 293 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 MOGAT3Q86VF5 341 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 CTHRC1Q96CG8 243 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 DIRC2Q96SL1 478 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 SMDT1Q9H4I9 107 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 TNFSF18Q9UNG2 199 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 KRTDAPP60985 99 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 PIGYQ3MUY2 71 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 ADIPOR1Q96A54 375 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 VSIG4Q9Y279 399 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 C1QCP02747 245 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 MMP7P09237 267 aaPredicted RBP11.17□□□□□ -0.62
PTCD1-201ENST00000292478 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
PTCD1-201ENST00000292478 S100A4P26447 101 aaKnown RBP11.17□□□□□ -0.62
PTCD1-201ENST00000292478 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 HIKESHIQ53FT3 197 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 ADAD2Q8NCV1 583 aaKnown RBP11.17□□□□□ -0.62
PTCD1-201ENST00000292478 SAP30LQ9HAJ7 183 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 SIRT7Q9NRC8 400 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 C1RLQ9NZP8 487 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 NPTNQ9Y639 398 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 IGLV1-36A0A0B4J1U3 117 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 C3AR1Q16581 482 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 TSPO2Q5TGU0 170 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 MDP1Q86V88 176 aa11.17□□□□□ -0.62
PTCD1-201ENST00000292478 POLR2AP24928 1970 aaKnown RBP11.16□□□□□ -0.62
PTCD1-201ENST00000292478 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
PTCD1-201ENST00000292478 TCTEX1D1Q8N7M0 179 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 TRBV5-7A0A0A0MS05 114 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 SPCS3P61009 180 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 HIST1H3AP68431 136 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 PGLYRP3Q96LB9 341 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 NARFLQ9H6Q4 476 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 DHRS7CA6NNS2 312 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 CD300CQ08708 224 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 DNASE2BQ8WZ79 361 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 FCGR3AP08637 254 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 OR4A8P0C604 315 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 COX7A1P24310 79 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 MRGPRGQ86SM5 289 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 FAM24BQ8N5W8 94 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 HEXA-AS1Q9H8Q6 139 aa11.16□□□□□ -0.62
PTCD1-201ENST00000292478 ZNF638Q14966 1978 aaKnown RBP11.15□□□□□ -0.62
PTCD1-201ENST00000292478 NPIPB13A6NJU9 1138 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 PATE3B3GLJ2 98 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 MFNGO00587 321 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 UPK3AO75631 287 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 IGHMP01871 453 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 TMEM50BP56557 158 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 P2RY6Q15077 328 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 TNXAQ16473 311 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 SLC23A3Q6PIS1 610 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 OR52L2PQ8NGH6 319 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 TMEM37Q8WXS4 190 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 RP1L1Q8IWN7 2480 aaPredicted RBP11.15□□□□□ -0.62
PTCD1-201ENST00000292478 NKX2-6A6NCS4 301 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 PDE6DO43924 150 aa11.15□□□□□ -0.62
PTCD1-201ENST00000292478 PITX3O75364 302 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms