RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LPAR5Q9H1C0 372 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 UNKLQ9H9P5 680 aaKnown RBP4.16□□□□□ -1.74
UBR1-201ENST00000290650 NIT2Q9NQR4 276 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 TUBG2Q9NRH3 451 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 SMCO4Q9NRQ5 59 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 PRELID3BQ9Y3B1 194 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 A0A1W2PPH5 198 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 ZNF727A8MUV8 499 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 OR7C2O60412 319 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 ZIC3O60481 467 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 CRHP06850 196 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 STARD6P59095 220 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 GUK1Q16774 197 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 ISXQ2M1V0 245 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 OR52M1Q8NGK5 317 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 ZNF524Q96C55 264 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 ABHD14BQ96IU4 210 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 GFI1Q99684 422 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 SAMD10Q9BYL1 202 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 TAAR3PQ9P1P4 343 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 LIPGQ9Y5X9 500 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 TRBV5-5A0A0J9YX44 114 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 LYPD3O95274 346 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 HPP00738 406 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 HEXAP06865 529 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 UNC119Q13432 240 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 ZNF273Q14593 569 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 DEGS2Q6QHC5 323 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 SARAFQ96BY9 339 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 FAM103A1Q9BTL3 118 aaKnown RBP4.16□□□□□ -1.74
UBR1-201ENST00000290650 SH3BGRL3Q9H299 93 aa4.16□□□□□ -1.74
UBR1-201ENST00000290650 FAM74A7A6NL05 159 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 OR5G3P0C626 314 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 PSMB3P49720 205 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 FAM74A3Q4VXF1 159 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 MOGAT3Q86VF5 341 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 STPG2Q8N412 459 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 NANPQ8TBE9 248 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 RND1Q92730 232 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 GPR87Q9BY21 358 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 HEXA-AS1Q9H8Q6 139 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 UCK1Q9HA47 277 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 TNFRSF19Q9NS68 423 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 ARFGEF3Q5TH69 2177 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 TRIM77I1YAP6 450 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 PPYP01298 95 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 ZBTB25P24278 435 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 PPP1CCP36873 323 aaKnown RBP4.15□□□□□ -1.74
UBR1-201ENST00000290650 MMP16P51512 607 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 ZNF239Q16600 458 aaKnown RBP4.15□□□□□ -1.74
UBR1-201ENST00000290650 ACSM6Q6P461 480 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 POC1BQ8TC44 478 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 VOPP1Q96AW1 172 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 LRFN3Q9BTN0 628 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 PCED1AQ9H1Q7 454 aa4.15□□□□□ -1.74
UBR1-201ENST00000290650 A0A1W2PPQ1 181 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 TUBAL3A6NHL2 446 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ABCD4O14678 606 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ST8SIA5O15466 376 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 YIF1AO95070 293 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 DTYMKP23919 212 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ECI1P42126 302 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 RAB5CP51148 216 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 SRPXP78539 464 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ZNF260Q3ZCT1 412 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ETFRF1Q6IPR1 90 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 C1orf87Q8N0U7 546 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 BVESQ8NE79 360 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 OR10P1Q8NGE3 313 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 DNASE2BQ8WZ79 361 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 MRPS24Q96EL2 167 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 CHST5Q9GZS9 411 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 SLC17A5Q9NRA2 495 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 LIN7CQ9NUP9 197 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 RASL12Q9NYN1 266 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ZNF319Q9P2F9 582 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 CLN8Q9UBY8 286 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 RAG2P55895 527 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 RPP30P78346 268 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 TRA2AQ13595 282 aaKnown RBP eCLIP4.15□□□□□ -1.75
UBR1-201ENST00000290650 GUCA2BQ16661 112 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 RNF151Q2KHN1 245 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 FFAR4Q5NUL3 377 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 VKORC1L1Q8N0U8 176 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 RAB18Q9NP72 206 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 PIEZO2Q9H5I5 2752 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 TRAF3IP2O43734 574 aaPredicted RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 IGHV3-48P01763 117 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 TBPP20226 339 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 COX7A1P24310 79 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 SRSF6Q13247 344 aaKnown RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 ATRAIDQ6UW56 229 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 C12orf57Q99622 126 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 VPS25Q9BRG1 176 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 C5orf66Q9H5L9 145 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 ONECUT1Q9UBC0 465 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 CHCHD2Q9Y6H1 151 aaPredicted RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 NUP210Q8TEM1 1887 aaPredicted RBP4.15□□□□□ -1.75
UBR1-201ENST00000290650 FAM157AC9JC47 383 aa4.15□□□□□ -1.75
UBR1-201ENST00000290650 E9PQ18 207 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms