RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RAB24Q969Q5 203 aa9.98□□□□□ -0.81
NPC1L1-201ENST00000289547 LANCL2Q9NS86 450 aa9.98□□□□□ -0.81
NPC1L1-201ENST00000289547 ERRFI1Q9UJM3 462 aaPredicted RBP9.98□□□□□ -0.81
NPC1L1-201ENST00000289547 CABIN1Q9Y6J0 2220 aa9.98□□□□□ -0.81
NPC1L1-201ENST00000289547 NPIPB9F8W1W9 429 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 SPRY1O43609 319 aaPredicted RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 NRASP01111 189 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 GCGP01275 180 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 C6orf201Q7Z4U5 140 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 ZNF738Q8NE65 137 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 SPSB2Q99619 263 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 OR5AC2Q9NZP5 309 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 IFI6P09912 130 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 DYNLT3P51808 116 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 DRAM2Q6UX65 266 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 SLC25A26Q70HW3 274 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 PPP1R32Q7Z5V6 425 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 TP53RKQ96S44 253 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 ST6GALNAC2Q9UJ37 374 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 AHRRA9YTQ3 701 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 CDX4O14627 284 aaPredicted RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 LPAR6P43657 344 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 P2RY1P47900 373 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 PLA2G2CQ5R387 149 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 C20orf196Q8IYI0 205 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 NPDC1Q9NQX5 325 aaPredicted RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 DNAJB12Q9NXW2 375 aaKnown RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 OR2M5A3KFT3 312 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 M0R1X1 148 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 PAX5Q02548 391 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 PLGLAQ15195 96 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 RPS4Y2Q8TD47 263 aa9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 RBM14Q96PK6 669 aaKnown RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 SF3B5Q9BWJ5 86 aaKnown RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 LIN7CQ9NUP9 197 aaKnown RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
NPC1L1-201ENST00000289547 TPRP12270 2363 aaKnown RBP9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 PCOLCEQ15113 449 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 PDCD1Q15116 288 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 KISS1Q15726 138 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 RAB40CQ96S21 281 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 FAAP24Q9BTP7 215 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 CKAP5Q14008 2032 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 A0A096LPE4 126 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 A0A1W2PPZ6 126 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 DNPH1O43598 174 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 CD3EP07766 207 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 PSG6Q00889 435 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 OR8B8Q15620 311 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 OSR2Q8N2R0 312 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 NOXO1Q8NFA2 376 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 HIF1ANQ9NWT6 349 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 NAGKQ9UJ70 344 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 EP400Q96L91 3159 aa9.96□□□□□ -0.81
NPC1L1-201ENST00000289547 RAB29O14966 203 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 GCM2O75603 506 aaPredicted RBP9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 TIAF1O95411 115 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 GYPAP02724 150 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 RPS4XP62701 263 aaKnown RBP9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 ATP1A1-AS1Q5TC04 95 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 FOXB1Q99853 325 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 ZNF107Q9UII5 783 aaPredicted RBP9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 VAX2Q9UIW0 290 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 SEC16AO15027 2179 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 C9orf172C9J069 976 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 CTSDP07339 412 aaPredicted RBP9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 KLK2P20151 261 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 ATP6V0CP27449 155 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 SLC38A11Q08AI6 406 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 MICBQ29980 383 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 CEACAM16Q2WEN9 425 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 PEAR1Q5VY43 1037 aaPredicted RBP9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 VWA1Q6PCB0 445 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 RTL8AQ9BWD3 113 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 PARD6GQ9BYG4 376 aaPredicted RBP9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 DOCK6Q96HP0 2047 aa9.96□□□□□ -0.82
NPC1L1-201ENST00000289547 C3orf85A0A1B0GTC6 90 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SOCS1O15524 211 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CDC14BO60729 498 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 HRASP01112 189 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 KRASP01116 189 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A8P0DMV1 189 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A9P0DMV2 189 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 OR3A4PP47883 348 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 TAS2R45P59539 299 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SPCS3P61009 180 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 FMODQ06828 376 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 HLA-DRB5Q30154 266 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 CT45A2Q5DJT8 189 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 OR1P1Q8NH06 330 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 GMPPAQ96IJ6 420 aaPredicted RBP9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 ANGPTL4Q9BY76 406 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 TGIF2-C20orf24A0A0A6YYL0 155 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 NGFRP08138 427 aa9.95□□□□□ -0.82
NPC1L1-201ENST00000289547 FAM3AP98173 230 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms