RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FAM90A5PA8MXJ8 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 CDRT15L2A8MXV6 281 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A23PA8MXZ1 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 TIAF1O95411 115 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 OR5AC1P0C628 307 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A15PP0C7V4 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A13PP0C7W8 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A14PP0C7W9 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 FAM90A24PP0C7X0 464 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 TMEM225BP0DP42 221 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 LIFP15018 202 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 ATP6V0CP27449 155 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 HOXA6P31267 233 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 RND2P52198 227 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 SP6Q3SY56 376 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 TMEM211Q6ICI0 200 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 ZIC4Q8N9L1 334 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 ZFP62Q8NB50 900 aaPredicted RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 OR14L1PQ8NHC6 308 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 RTN4IP1Q8WWV3 396 aaPredicted RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 RBMXL1Q96E39 390 aaKnown RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 DEFB126Q9BYW3 111 aa8.97□□□□□ -0.97
SKA1-201ENST00000285116 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 RCL1Q9Y2P8 373 aaKnown RBP8.97□□□□□ -0.97
SKA1-201ENST00000285116 APC2O95996 2303 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 CLEC18AA5D8T8 446 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 F5H5K5 113 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 HSPA12AO43301 675 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 MMP9P14780 707 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 MTCP1P56278 107 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 PCOLCEQ15113 449 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 EXT1Q16394 746 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 ABCA11PQ4W5N1 156 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 TRIM61Q5EBN2 209 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 TMEM183AQ8IXX5 376 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 FBXL14Q8N1E6 418 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 CLEC18CQ8NCF0 446 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 OR10G4Q8NGN3 311 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 PIGTQ969N2 578 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 BOD1Q96IK1 185 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 OR6C1Q96RD1 312 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 SLC2A9Q9NRM0 540 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 DKKL1Q9UK85 242 aa8.96□□□□□ -0.97
SKA1-201ENST00000285116 CCDC187A0A096LP49 1063 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 NPIPA2E9PIF3 369 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 NPIPA3F8WFD2 350 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 CLDN34H7C241 214 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 GZMBP10144 247 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 SFTPCP11686 197 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 GABRR1P24046 479 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 PNRC1Q12796 327 aaPredicted RBP8.96□□□□□ -0.98
SKA1-201ENST00000285116 SNAI3Q3KNW1 292 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 OR52M1Q8NGK5 317 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 ABHD14AQ9BUJ0 271 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 ZNF286AQ9HBT8 521 aa8.96□□□□□ -0.98
SKA1-201ENST00000285116 MRPS17Q9Y2R5 130 aaKnown RBP8.96□□□□□ -0.98
SKA1-201ENST00000285116 IGKV1-27A0A075B6S5 117 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 GJE1A6NN92 205 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 PITX3O75364 302 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 HBE1P02100 147 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 CXCL12P48061 93 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 ZNF664Q8N3J9 261 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 OR2C3Q8N628 320 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 SNX22Q96L94 193 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 TMEM56Q96MV1 263 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 ZNF385AQ96PM9 386 aaKnown RBP8.95□□□□□ -0.98
SKA1-201ENST00000285116 HDHD3Q9BSH5 251 aaPredicted RBP8.95□□□□□ -0.98
SKA1-201ENST00000285116 FAAP24Q9BTP7 215 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 DUSP23Q9BVJ7 150 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 GPR87Q9BY21 358 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 PROK2Q9HC23 129 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 TMEM56-RWDD3S4R434 201 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 ZIC3O60481 467 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 SNRPCP09234 159 aaKnown RBP8.95□□□□□ -0.98
SKA1-201ENST00000285116 PGA5P0DJD9 388 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 CASP6P55212 293 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 RAC1P63000 192 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 TAF9Q16594 264 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 C4orf17Q53FE4 359 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 CLDND2Q8NHS1 167 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 CPT1CQ8TCG5 803 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 NPRL2Q8WTW4 380 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 REEP6Q96HR9 211 aa8.95□□□□□ -0.98
SKA1-201ENST00000285116 LY6G6EA0A0G2JKS1 128 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 PDCD6O75340 191 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 FGF5P12034 268 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 ASCL1P50553 236 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 FUT6P51993 359 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 RPL23AP62750 156 aaKnown RBP8.94□□□□□ -0.98
SKA1-201ENST00000285116 OSR2Q8N2R0 312 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 OR1F12Q8NHA8 337 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 TOMM40LQ969M1 308 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 SPSB4Q96A44 273 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 GNPNAT1Q96EK6 184 aaPredicted RBP8.94□□□□□ -0.98
SKA1-201ENST00000285116 IMMP1LQ96LU5 166 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 DDA1Q9BW61 102 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 ULBP2Q9BZM5 246 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 GPR173Q9NS66 373 aa8.94□□□□□ -0.98
SKA1-201ENST00000285116 PLEK2Q9NYT0 353 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms