RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TMEM52Q8NDY8 209 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 TMEM56Q96MV1 263 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 PCED1AQ9H1Q7 454 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 NKX2-6A6NCS4 301 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 HYAL1Q12794 435 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 MRGPRGQ86SM5 289 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 NHLRC2Q8NBF2 726 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 ADAT3Q96EY9 351 aaPredicted RBP14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 DTX4Q9Y2E6 619 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 OR2M5A3KFT3 312 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 LINC01387J3KSC0 135 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 DHRS11Q6UWP2 260 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 C11orf94C9JXX5 98 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 CYB5R3P00387 301 aaPredicted RBP14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 ZNF83P51522 516 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 ISXQ2M1V0 245 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 KHDC1LQ5JSQ8 128 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 KLK13Q9UKR3 277 aa14.46□□□□□ -0.09
SH3RF1-201ENST00000284637 SPTBP11277 2137 aa14.46□□□□□ -0.1
SH3RF1-201ENST00000284637 SLC35E3Q7Z769 313 aa14.46□□□□□ -0.1
SH3RF1-201ENST00000284637 TDHQ8IZJ6 230 aa14.46□□□□□ -0.1
SH3RF1-201ENST00000284637 TMEM191AQ9H0A3 160 aa14.46□□□□□ -0.1
SH3RF1-201ENST00000284637 MRPS18BQ9Y676 258 aaKnown RBP14.46□□□□□ -0.1
SH3RF1-201ENST00000284637 GLI3P10071 1580 aa14.46□□□□□ -0.1
SH3RF1-201ENST00000284637 CKAP5Q14008 2032 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 GCM2O75603 506 aaPredicted RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 LYZL6O75951 148 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 HOXC4P09017 264 aaPredicted RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 MDH2P40926 338 aaKnown RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 CYB561D1Q8N8Q1 229 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 ARRDC1-AS1Q9H2J1 176 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 SRD5A3Q9H8P0 318 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 MANBALQ9NQG1 85 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 COL18A1P39060 1754 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 TRDCB7Z8K6 153 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 ATP6V1FQ16864 119 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 FNDC7Q5VTL7 733 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 VWA1Q6PCB0 445 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 OR13G1Q8NGZ3 307 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 PRSS3P2Q8NHM4 247 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 LRRC29Q8WV35 223 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 DIRC3C9JPN6 131 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 C3orf80F5H4A9 247 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 OR5AL1P0C617 328 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 GNB2P62879 340 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 PIGYQ3MUY2 71 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 WFDC6Q9BQY6 131 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 HDHD3Q9BSH5 251 aaPredicted RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 IL36GQ9NZH8 169 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 TRAV39A0A0B4J263 110 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 HTR1DP28221 377 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 ACAA2P42765 397 aaKnown RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 RNPS1Q15287 305 aaKnown RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 OR10G8Q8NGN5 311 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 RNF133Q8WVZ7 376 aa14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 WDR61Q9GZS3 305 aaKnown RBP14.45□□□□□ -0.1
SH3RF1-201ENST00000284637 NDUFB3O43676 98 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 CD1AP06126 327 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 PGA4P0DJD7 388 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 PGA5P0DJD9 388 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 AURKAIP1Q9NWT8 199 aaPredicted RBP14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 ZP1P60852 638 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 OR4B1Q8NGF8 309 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 CES1P1Q9UKY3 287 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 MDKP21741 143 aaPredicted RBP14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 S100A4P26447 101 aaKnown RBP14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 MMP16P51512 607 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 C19orf48Q6RUI8 117 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 RASL10BQ96S79 203 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 PRSS27Q9BQR3 290 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 AAMDCQ9H7C9 122 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 DSPPQ9NZW4 1301 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 A0A1B0GTQ1 180 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 A0A1W2PQD3 144 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 BGLAPP02818 100 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 KIR3DL2P43630 455 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 LSM6P62312 80 aaKnown RBP14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 OPN3Q9H1Y3 402 aaPredicted RBP14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 MCM3APO60318 1980 aa14.44□□□□□ -0.1
SH3RF1-201ENST00000284637 OR5B21A6NL26 309 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 SRD5A2P31213 254 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 LRRC10Q5BKY1 277 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 OR4A47Q6IF82 309 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 OR5D13Q8NGL4 314 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 LRRC3BQ96PB8 259 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 SH2D2AQ9NP31 389 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 CACNA1IQ9P0X4 2223 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 ZNF785A8K8V0 405 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 CSN3P07498 182 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 RAC3P60763 192 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 IL11RAQ14626 422 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 PTPMT1Q8WUK0 201 aaPredicted RBP14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 SSMEM1Q8WWF3 244 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 TRGC1P0CF51 173 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 TNFRSF1AP19438 455 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 BCL3P20749 454 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 ATP6V0CP27449 155 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 Q1RN00 199 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 MRGPRFQ96AM1 343 aa14.43□□□□□ -0.1
SH3RF1-201ENST00000284637 WASHC3Q9Y3C0 194 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms