RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 TOMM40LQ969M1 308 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 SEBOXQ9HB31 216 aaPredicted RBP18.56■□□□□ 0.56
CCDC7-201ENST00000277657 RFPL4AA6NLU0 287 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 RFPL4AL1F8VTS6 287 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 LHBP01229 141 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 OR4A8P0C604 315 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 EGR1P18146 543 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 ATXN7L3Q14CW9 347 aaPredicted RBP18.56■□□□□ 0.56
CCDC7-201ENST00000277657 ADAM5Q6NVV9 412 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 MOGAT3Q86VF5 341 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 GCSAMQ8N6F7 178 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 MBNL3Q9NUK0 354 aaKnown RBP18.56■□□□□ 0.56
CCDC7-201ENST00000277657 WIPI2Q9Y4P8 454 aa18.56■□□□□ 0.56
CCDC7-201ENST00000277657 NKX2-6A6NCS4 301 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 CRYM-AS1A6NIL9 109 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 TUSC2O75896 110 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 ADH4P08319 380 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 FXYD4P59646 89 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 HERV-K104P61576 105 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 SEC61A1P61619 476 aaKnown RBP18.55■□□□□ 0.56
CCDC7-201ENST00000277657 PIK3IP1Q96FE7 263 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 CABLES2Q9BTV7 478 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 PCDHB10Q9UN67 800 aa18.55■□□□□ 0.56
CCDC7-201ENST00000277657 TPRP12270 2363 aaKnown RBP18.54■□□□□ 0.56
CCDC7-201ENST00000277657 ICE1Q9Y2F5 2266 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 SHISA9B4DS77 424 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 BET1O15155 118 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 RBMXP38159 391 aaKnown RBP18.54■□□□□ 0.56
CCDC7-201ENST00000277657 TNFAIP6P98066 277 aaPredicted RBP18.54■□□□□ 0.56
CCDC7-201ENST00000277657 SLC9A3R2Q15599 337 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 DMRTC2Q8IXT2 367 aaPredicted RBP18.54■□□□□ 0.56
CCDC7-201ENST00000277657 SLC38A6Q8IZM9 456 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 TMEM246Q9BRR3 403 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 RSRP1Q9BUV0 290 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 NDRG3Q9UGV2 375 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 HSPB11Q9Y547 144 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 NBASA2RRP1 2371 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 RELNP78509 3460 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 TNFSF4P23510 183 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 KCNJ3P48549 501 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 CDSNQ15517 529 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 ANKRD55Q3KP44 614 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 KCTD9Q7L273 389 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 OR5T2Q8NGG2 359 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 GRPEL2Q8TAA5 225 aa18.54■□□□□ 0.56
CCDC7-201ENST00000277657 TRBV6-7A0A0A0MS04 114 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 DIRAS3O95661 229 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 CD8AP01732 235 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 PSG2P11465 335 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 PIGPP57054 158 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 SORDQ00796 357 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 COL10A1Q03692 680 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 SLC35E4Q6ICL7 350 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 SGPP2Q8IWX5 399 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 CD177Q8N6Q3 437 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 COQ8AQ8NI60 647 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 ERGIC1Q969X5 290 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 PLPPR2Q96GM1 343 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 DIRC2Q96SL1 478 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 GCM1Q9NP62 436 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 TRAPPC2LQ9UL33 140 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 COL6A6A6NMZ7 2263 aa18.53■□□□□ 0.56
CCDC7-201ENST00000277657 TMEM30CPA0ZSE6 113 aa18.52■□□□□ 0.56
CCDC7-201ENST00000277657 NPIPB11E5RHQ5 1161 aa18.52■□□□□ 0.56
CCDC7-201ENST00000277657 CCSO14618 274 aa18.52■□□□□ 0.56
CCDC7-201ENST00000277657 IFNA2P01563 188 aa18.52■□□□□ 0.56
CCDC7-201ENST00000277657 GRNP28799 593 aaKnown RBP18.52■□□□□ 0.56
CCDC7-201ENST00000277657 OR3A1P47881 315 aa18.52■□□□□ 0.56
CCDC7-201ENST00000277657 METRNQ9UJH8 293 aa18.52■□□□□ 0.56
CCDC7-201ENST00000277657 ERRFI1Q9UJM3 462 aaPredicted RBP18.52■□□□□ 0.56
CCDC7-201ENST00000277657 VSTM5A8MXK1 200 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 RGS13O14921 159 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 TFF1P04155 84 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 CD55P08174 381 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 PRDX2P32119 198 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 PAX5Q02548 391 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 SNTB1Q13884 538 aaKnown RBP18.52■□□□□ 0.55
CCDC7-201ENST00000277657 LINC01560Q8TB33 94 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 Q8TCH9 128 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 LRRC46Q96FV0 321 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 RAB18Q9NP72 206 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 SLC2A9Q9NRM0 540 aa18.52■□□□□ 0.55
CCDC7-201ENST00000277657 KALRNO60229 2985 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 IGKV1D-17A0A075B6S4 117 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 TRAV39A0A0B4J263 110 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 SNRPD2P62316 118 aaKnown RBP18.51■□□□□ 0.55
CCDC7-201ENST00000277657 HMGN3Q15651 99 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 LGALSLQ3ZCW2 172 aaPredicted RBP18.51■□□□□ 0.55
CCDC7-201ENST00000277657 ABCA11PQ4W5N1 156 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 CA5BP1Q8WTZ4 195 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 RTN4IP1Q8WWV3 396 aaPredicted RBP18.51■□□□□ 0.55
CCDC7-201ENST00000277657 COQ2Q96H96 371 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 SHARPINQ9H0F6 387 aa18.51■□□□□ 0.55
CCDC7-201ENST00000277657 TEX13DA0A0J9YY54 714 aaPredicted RBP18.5■□□□□ 0.55
CCDC7-201ENST00000277657 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.5■□□□□ 0.55
CCDC7-201ENST00000277657 C17orf100A8MU93 164 aa18.5■□□□□ 0.55
CCDC7-201ENST00000277657 E7EQL1 145 aa18.5■□□□□ 0.55
CCDC7-201ENST00000277657 SERPINF1P36955 418 aa18.5■□□□□ 0.55
CCDC7-201ENST00000277657 H1FOOQ8IZA3 346 aaPredicted RBP18.5■□□□□ 0.55
CCDC7-201ENST00000277657 GALNT14Q96FL9 552 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms