RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 A0A0G2JMP0 313 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 A0A0X1KG70 313 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 FABP12A6NFH5 140 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 LCN2P80188 198 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 PITPNAQ00169 270 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 PAX2Q02962 417 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 MEF2CQ06413 473 aaPredicted RBP14.21□□□□□ -0.13
SKP2-201ENST00000274254 CD276Q5ZPR3 534 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 Q6ZPA2 131 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 TCF23Q7RTU1 214 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 LY6G5BQ8NDX9 201 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 OR4M2Q8NGB6 313 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 MRPL30Q8TCC3 161 aaKnown RBP14.21□□□□□ -0.13
SKP2-201ENST00000274254 RIMS4Q9H426 269 aaPredicted RBP14.21□□□□□ -0.13
SKP2-201ENST00000274254 LPAR3Q9UBY5 353 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 V9GYH0 126 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 ABCA1O95477 2261 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 TEX15Q9BXT5 2789 aa14.21□□□□□ -0.13
SKP2-201ENST00000274254 MEIKINA0A087WXM9 373 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 POM121CA8CG34 1229 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 H7C1Q1 480 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 SSX5O60225 188 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 CD3GP09693 182 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 ARFRP1Q13795 201 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 CR1LQ2VPA4 569 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 TMEM249Q2WGJ8 235 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 SPANXN2Q5MJ10 180 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 TMEM200BQ69YZ2 307 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 PYHIN1Q6K0P9 492 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 ZNF880Q6PDB4 577 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 SPNS3Q6ZMD2 512 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 SNX29P2Q8IUI4 249 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 C15orf40Q8WUR7 153 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 NUDCD2Q8WVJ2 157 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 GCDHQ92947 438 aaPredicted RBP14.2□□□□□ -0.14
SKP2-201ENST00000274254 MBNL3Q9NUK0 354 aaKnown RBP14.2□□□□□ -0.14
SKP2-201ENST00000274254 hADV38S2A0JD32 116 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 B4DSR2 109 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 GNG2P59768 71 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 IL18Q14116 193 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 OR4K15Q8NH41 348 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 CORO2AQ92828 525 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 DMRTB1Q96MA1 342 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 OR6C3Q9NZP0 311 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 LINC00312Q9Y6C7 94 aa14.2□□□□□ -0.14
SKP2-201ENST00000274254 ZNF469Q96JG9 3925 aaPredicted RBP14.19□□□□□ -0.14
SKP2-201ENST00000274254 CSPG4Q6UVK1 2322 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 ACANP16112 2415 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 PPIAL4CA0A0B4J2A2 164 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 MEIOCA2RUB1 952 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 MSMBP08118 114 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 FCGR3AP08637 254 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 IGHV4-31P0DP07 118 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 PTBP1P26599 531 aaKnown RBP eCLIP14.19□□□□□ -0.14
SKP2-201ENST00000274254 PRSS3P35030 304 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 MRPS15P82914 257 aaKnown RBP14.19□□□□□ -0.14
SKP2-201ENST00000274254 ZNF273Q14593 569 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 ZNF79Q15937 498 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 FAM131AQ6UXB0 335 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 OR13A1Q8NGR1 328 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 COX4I2Q96KJ9 171 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 LPAR2Q9HBW0 351 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 AKIP1Q9NQ31 210 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 MMP26Q9NRE1 261 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 TRAPPC2LQ9UL33 140 aa14.19□□□□□ -0.14
SKP2-201ENST00000274254 UBE2J1Q9Y385 318 aaPredicted RBP14.19□□□□□ -0.14
SKP2-201ENST00000274254 ZANQ9Y493 2812 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 TRGV10A0A0A0MS01 117 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 IGHV2-70DA0A0C4DH43 119 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 CTDSPLO15194 276 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 ENSAO43768 121 aaKnown RBP14.18□□□□□ -0.14
SKP2-201ENST00000274254 PPIAL4GP0DN37 164 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 CGB3P0DN86 165 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 CGB7P0DN87 165 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 RCC1P18754 421 aaPredicted RBP14.18□□□□□ -0.14
SKP2-201ENST00000274254 DTYMKP23919 212 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 GZMKP49863 264 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 GUCA2AQ02747 115 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 FAM185AQ8N0U4 392 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 MFSD4AQ8N468 514 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 ZNF565Q8N9K5 539 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 GPX8Q8TED1 209 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 CCDC107Q8WV48 283 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 MSI2Q96DH6 328 aaKnown RBP14.18□□□□□ -0.14
SKP2-201ENST00000274254 OCSTAMPQ9BR26 566 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 SCPEP1Q9HB40 452 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 CHMP1AQ9HD42 196 aaPredicted RBP14.18□□□□□ -0.14
SKP2-201ENST00000274254 Q9N2K0 584 aa14.18□□□□□ -0.14
SKP2-201ENST00000274254 TRAV39A0A0B4J263 110 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 KIR2DS1A0A191URI9 304 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 A0A1W2PQ09 198 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 MEX3AA1L020 520 aaKnown RBP14.17□□□□□ -0.14
SKP2-201ENST00000274254 SULT1C2O00338 296 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 LPLP06858 475 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 GLP1RP43220 463 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 DLX6P56179 175 aa14.17□□□□□ -0.14
SKP2-201ENST00000274254 MRPS10P82664 201 aaKnown RBP14.17□□□□□ -0.14
SKP2-201ENST00000274254 SRSF7Q16629 238 aaKnown RBP eCLIP14.17□□□□□ -0.14
SKP2-201ENST00000274254 MOB1BQ7L9L4 216 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms