RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 IFNA21P01568 189 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 MBPP02686 304 aaPredicted RBP17.24■□□□□ 0.35
RAB5A-201ENST00000273047 AGAP20933 346 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 RPL12P30050 165 aaKnown RBP17.24■□□□□ 0.35
RAB5A-201ENST00000273047 APLNRP35414 380 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 ARR3P36575 388 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 ID4P47928 161 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 HOXA4Q00056 320 aaPredicted RBP17.24■□□□□ 0.35
RAB5A-201ENST00000273047 OR1K1Q8NGR3 316 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 KIRREL1Q96J84 757 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 AKR1E2Q96JD6 320 aa17.24■□□□□ 0.35
RAB5A-201ENST00000273047 DIDO1Q9BTC0 2240 aaKnown RBP17.24■□□□□ 0.35
RAB5A-201ENST00000273047 TRAV39A0A0B4J263 110 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 ECI1P42126 302 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 HERPUD1Q15011 391 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 TMEM211Q6ICI0 200 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 EDARADDQ8WWZ3 215 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 ERGIC1Q969X5 290 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 MOB3AQ96BX8 217 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 TECTBQ96PL2 329 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 RPS10P5Q9NQ39 176 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 RYDENQ9NUL5 291 aaKnown RBP17.23■□□□□ 0.35
RAB5A-201ENST00000273047 TRAPPC2LH3BP13 241 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 K7EPK0 472 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 SS18L1O75177 396 aaPredicted RBP17.23■□□□□ 0.35
RAB5A-201ENST00000273047 DEDDO75618 318 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 LYZL6O75951 148 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 FGF12P61328 243 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 HERV-K104P61576 105 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 SPIN3Q5JUX0 258 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 FBXW9Q5XUX1 488 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 ZNF600Q6ZNG1 722 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 FAM71E2Q8N5Q1 922 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 FDCSPQ8NFU4 85 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 PARD6AQ9NPB6 346 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 METTL1Q9UBP6 276 aaKnown RBP17.23■□□□□ 0.35
RAB5A-201ENST00000273047 MEMO1Q9Y316 297 aa17.23■□□□□ 0.35
RAB5A-201ENST00000273047 RP1L1Q8IWN7 2480 aaPredicted RBP17.23■□□□□ 0.35
RAB5A-201ENST00000273047 SLC33A1O00400 549 aaPredicted RBP17.22■□□□□ 0.35
RAB5A-201ENST00000273047 PET100P0DJ07 73 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 S100PP25815 95 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 GNRHRP30968 328 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 SOX8P57073 446 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 MSI2Q96DH6 328 aaKnown RBP17.22■□□□□ 0.35
RAB5A-201ENST00000273047 TAF9BQ9HBM6 251 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 PLA2G2EQ9NZK7 142 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 FBXL17Q9UF56 701 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 ZFHX2Q9C0A1 2572 aaPredicted RBP17.22■□□□□ 0.35
RAB5A-201ENST00000273047 IGKV1D-13A0A0B4J2D9 117 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 TNFSF12O43508 249 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 MT-ND4LP03901 98 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 IGKV1-13P0DP09 117 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 GLP1RP43220 463 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 ASCL1P50553 236 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 TMEM33P57088 247 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 UBALD1Q8TB05 177 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 HIST1H2AAQ96QV6 131 aa17.22■□□□□ 0.35
RAB5A-201ENST00000273047 TRBV23-1A0A0A0MS06 115 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 CST4P01036 141 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 SULT1A2P50226 295 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 DVL1P1P54792 670 aaPredicted RBP17.21■□□□□ 0.35
RAB5A-201ENST00000273047 ALKBH6Q3KRA9 238 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 OR5P3Q8WZ94 311 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 BCL2L2Q92843 193 aaPredicted RBP17.21■□□□□ 0.35
RAB5A-201ENST00000273047 PRRX2Q99811 253 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 TUBD1Q9UJT1 453 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 SPTBN2O15020 2390 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 CACNA1GO43497 2377 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 ZNF292O60281 2723 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 IGKV1-6A0A0C4DH72 117 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 TXNL1O43396 289 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 NXPH3O95157 252 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 IGHV2-70P01814 119 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 COX5BP10606 129 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 TNFSF10P50591 281 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 EIF5AL1Q6IS14 154 aaKnown RBP17.21■□□□□ 0.35
RAB5A-201ENST00000273047 LIAT1Q6ZQX7 453 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 SLC35G3Q8N808 338 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 IP6K3Q96PC2 410 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 TCEAL7Q9BRU2 100 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 AMDHD2Q9Y303 409 aa17.21■□□□□ 0.35
RAB5A-201ENST00000273047 IDH3GP51553 393 aaPredicted RBP17.2■□□□□ 0.34
RAB5A-201ENST00000273047 ZNF818PQ6ZRF7 136 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 MKXQ8IYA7 352 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 Q9N2K0 584 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 DNAJB11Q9UBS4 358 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 A6NLC8 198 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 ANKRD30BLA7E2S9 258 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 HSD17B6O14756 317 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 OR8U9P0C7N5 309 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 ZNF14P17017 642 aaPredicted RBP17.2■□□□□ 0.34
RAB5A-201ENST00000273047 TMEM268Q5VZI3 342 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 SUMF2Q8NBJ7 301 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 OR8U1Q8NH10 309 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 ISOC2Q96AB3 205 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 GALNT14Q96FL9 552 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 KPTNQ9Y664 436 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 DMXL2Q8TDJ6 3036 aa17.2■□□□□ 0.34
RAB5A-201ENST00000273047 CACNA1DQ01668 2161 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms