RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ALKBH1Q13686 389 aaKnown RBP7.03□□□□□ -1.28
TPM3-201ENST00000271850 EBI3Q14213 229 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 HNF4GQ14541 408 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 KPNB1Q14974 876 aaKnown RBP7.03□□□□□ -1.28
TPM3-201ENST00000271850 KISS1Q15726 138 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 LTC4SQ16873 150 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 DEFB136Q30KP8 78 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 PIGYQ3MUY2 71 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 SLC25A30Q5SVS4 291 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 LPCAT4Q643R3 524 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 XAF1Q6GPH4 301 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 ELP2Q6IA86 826 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 FAM220AQ7Z4H9 259 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 PARP16Q8N5Y8 322 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 CHST4Q8NCG5 386 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 Q8NFD4 153 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 OR4D6Q8NGJ1 314 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 OR13C3Q8NGS6 347 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 OR10K1Q8NGX5 313 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 OR9G1Q8NH87 305 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 RFESDQ8TAC1 157 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 CNIH3Q8TBE1 160 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 TOMM40LQ969M1 308 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 PDCD1LG2Q9BQ51 273 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 ZCCHC4Q9H5U6 513 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 PLSCR3Q9NRY6 295 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 IDI2-AS1Q9NZ38 188 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 EXOGQ9Y2C4 368 aaKnown RBP7.03□□□□□ -1.28
TPM3-201ENST00000271850 LSM4Q9Y4Z0 139 aaKnown RBP7.03□□□□□ -1.28
TPM3-201ENST00000271850 PCDHGB5Q9Y5G0 923 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 DNAH1Q9P2D7 4330 aa7.03□□□□□ -1.28
TPM3-201ENST00000271850 MEIKINA0A087WXM9 373 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 IGHV3-72A0A0B4J1Y9 119 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 ZNF736B4DX44 427 aaPredicted RBP7.02□□□□□ -1.29
TPM3-201ENST00000271850 H3BNX3 289 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 C15orf65H3BRN8 121 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 J3QLW9 94 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 TOR1AO14656 332 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 DEGS1O15121 323 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 FGF16O43320 207 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 SULT1B1O43704 296 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 IGKV1D-33P01593 117 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 IGKV1-33P01594 117 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 RPLP1P05386 114 aaKnown RBP7.02□□□□□ -1.29
TPM3-201ENST00000271850 HTR1AP08908 422 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 ZNF19P17023 458 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 TMEM11P17152 192 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 ATP6V1E1P36543 226 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 GNG10P50151 68 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 LUMP51884 338 aaPredicted RBP7.02□□□□□ -1.29
TPM3-201ENST00000271850 PRRX1P54821 245 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 SNRPGP62308 76 aaKnown RBP7.02□□□□□ -1.29
TPM3-201ENST00000271850 CFHR3Q02985 330 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 ZNF691Q5VV52 312 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 ASCL4Q6XD76 172 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 LHFPL3Q86UP9 236 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 STPG2Q8N412 459 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 Q8N9W7 124 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 TMEM104Q8NE00 496 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 KLHL30-AS1Q8NEE0 82 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 UBALD1Q8TB05 177 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 MRGPRDQ8TDS7 321 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 RPEQ96AT9 228 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 CENPNQ96H22 339 aaPredicted RBP7.02□□□□□ -1.29
TPM3-201ENST00000271850 HRASLS5Q96KN8 279 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 NR1H4Q96RI1 486 aaPredicted RBP7.02□□□□□ -1.29
TPM3-201ENST00000271850 ALG8Q9BVK2 526 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 NCOR1P1Q9H4R4 102 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 RHOFQ9HBH0 211 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 OR6C3Q9NZP0 311 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 GLS2Q9UI32 602 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
TPM3-201ENST00000271850 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 A0A1W2PP11 408 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 DAPL1A0PJW8 107 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 FUOMA2VDF0 154 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 M0QZK8 103 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 EI24O14681 340 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 SLC31A2O15432 143 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 FAM106CPP0CH98 169 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 TMEM225BP0DP42 221 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 CEACAM3P40198 252 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 MYCNOSP40205 109 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 VHLP40337 213 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 MNDAP41218 407 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 REG1BP48304 166 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 MTNR1BP49286 362 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 GTF2A1P52655 376 aaPredicted RBP7.01□□□□□ -1.29
TPM3-201ENST00000271850 CD69Q07108 199 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 ZNF816Q0VGE8 651 aaPredicted RBP7.01□□□□□ -1.29
TPM3-201ENST00000271850 GALEQ14376 348 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 IL13RA2Q14627 380 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 ZIK1Q3SY52 487 aaPredicted RBP7.01□□□□□ -1.29
TPM3-201ENST00000271850 PAN3Q58A45 887 aaKnown RBP7.01□□□□□ -1.29
TPM3-201ENST00000271850 ASPHD1Q5U4P2 390 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 KCTD20Q7Z5Y7 419 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 ACBD7Q8N6N7 88 aa7.01□□□□□ -1.29
TPM3-201ENST00000271850 RNF152Q8N8N0 203 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms