RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TPRP12270 2363 aaKnown RBP17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 IGLV3-9A0A075B6K5 115 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 CCL21O00585 134 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 NXPH2O95156 264 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 PRAMEF6Q5VXH4 476 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 Q6ZPA2 131 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 KDF1Q8NAX2 398 aaPredicted RBP17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 POC1AQ8NBT0 407 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 NEK7Q8TDX7 302 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 ARPC5LQ9BPX5 153 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 SYT3Q9BQG1 590 aa17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 CHMP1AQ9HD42 196 aaPredicted RBP17.41■□□□□ 0.38
LYSMD2-201ENST00000267838 TRAV24A0A0B4J272 114 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 CEACAM18A8MTB9 384 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 FAM25EA8MYX2 175 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 HSPB6O14558 160 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 VAMP1P23763 118 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 NPY4RP50391 375 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 ASCL1P50553 236 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 SNTB1Q13884 538 aaKnown RBP17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 ZNF273Q14593 569 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 LRRC37A5PQ49AS3 106 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 Q6P435 159 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 SLC22A25Q6T423 547 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 UQCC3Q6UW78 93 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 ZNF826PQ6ZT77 177 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 NUP37Q8NFH4 326 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 OR2Z1Q8NG97 314 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 GTF3AQ92664 365 aaKnown RBP17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 SEC22AQ96IW7 307 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 NMES1Q9C002 83 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 ZC4H2Q9NQZ6 224 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 NECAP2Q9NVZ3 263 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 A0A0B4J2A0 478 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 A6NLC8 198 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 DBX1A6NMT0 343 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 HS3ST1O14792 307 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 DEGS1O15121 323 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 GLAP06280 429 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 PAN3Q58A45 887 aaKnown RBP17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 AADACL3Q5VUY0 350 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 BARX1Q9HBU1 254 aaPredicted RBP17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 HES4Q9HCC6 221 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 TAS2R3Q9NYW6 316 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 SHPKQ9UHJ6 478 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 GPR132Q9UNW8 380 aa17.4■□□□□ 0.38
LYSMD2-201ENST00000267838 DPRXA6NFQ7 191 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 NAPSAO96009 420 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 ZNF44P15621 663 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 AKR1C4P17516 323 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 FPR2P25090 351 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 CD200P41217 278 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 RBM39Q14498 530 aaKnown RBP17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 WDR82Q6UXN9 313 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 STOML3Q8TAV4 291 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 CASTOR1Q8WTX7 329 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 RDH5Q92781 318 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 WFIKKN1Q96NZ8 548 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 UFSP2Q9NUQ7 469 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 ACACBO00763 2458 aa17.39■□□□□ 0.37
LYSMD2-201ENST00000267838 F5H0A9 414 aaPredicted RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 TEX46H3BTG2 121 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 ABCD4O14678 606 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 OR5H8P0DN80 308 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 PSMB6P28072 239 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 SELENOVP59797 346 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 ZNF146Q15072 292 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 SRSF7Q16629 238 aaKnown RBP eCLIP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 TMEM128Q5BJH2 165 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 SPIN3Q5JUX0 258 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 FAM122CQ6P4D5 195 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 PEG10Q86TG7 708 aaKnown RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 ADAD2Q8NCV1 583 aaKnown RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 ZNF2Q9BSG1 426 aaPredicted RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 MRPL37Q9BZE1 423 aaKnown RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 C5orf51A6NDU8 294 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 CHRNB4P30926 498 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 BSPH1Q075Z2 132 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 FIP1L1Q6UN15 594 aaKnown RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 Q6ZS49 121 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 KCTD9Q7L273 389 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 TMEM185AQ8NFB2 350 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 WDR13Q9H1Z4 485 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 RIMS4Q9H426 269 aaPredicted RBP17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 Q9N2K0 584 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 TAAR3PQ9P1P4 343 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 MBD2Q9UBB5 411 aa17.38■□□□□ 0.37
LYSMD2-201ENST00000267838 TRBV6-7A0A0A0MS04 114 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 TRIM77I1YAP6 450 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 OR2H2O95918 312 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 CTRB1P17538 263 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 ATXN7L3Q14CW9 347 aaPredicted RBP17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 FAM74A1Q5RGS3 127 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 CTRB2Q6GPI1 263 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 PCSK4Q6UW60 755 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 MRPL24Q96A35 216 aaKnown RBP17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 C5orf66Q9H5L9 145 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 CADP27708 2225 aa17.37■□□□□ 0.37
LYSMD2-201ENST00000267838 RAB19A4D1S5 217 aa17.36■□□□□ 0.37
LYSMD2-201ENST00000267838 SIRPB1O00241 398 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms